DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdmc and MIS1

DIOPT Version :10

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_009640.1 Gene:MIS1 / 852378 SGDID:S000000288 Length:975 Species:Saccharomyces cerevisiae


Alignment Length:300 Identity:134/300 - (44%)
Similarity:187/300 - (62%) Gaps:18/300 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IIDGKAIAQEVRTQLAHELKGMEAAGYP--KPHLTAVIVGEDPASEKYVANKMVACREVGISSET 72
            |:.|:.:||.:|.:...|::.::.. :|  ||.|..:.||..|.|..||..|:.|.::..:....
Yeast    37 ILSGRKLAQSIREKANDEIQAIKLK-HPNFKPTLKIIQVGARPDSSTYVRMKLKASKDSNVDCII 100

  Fly    73 KRLPASTTQEELLQLIADLNKDPQVTGILVQLPVPEHINERTICNAVDVDKDVDGFNEVNIGRTA 137
            ::|||..|:.|||:.|:|:|.|..:.|:|:|||:|.|::|.||.||||..||||||:..|.|..|
Yeast   101 EKLPAEITEVELLKKISDINDDDSIHGLLIQLPLPRHLDETTITNAVDFKKDVDGFHRYNAGELA 165

  Fly   138 L--DMEANIPATPLGVKRLLEHMKIETLGRNAVVVGRSKNVSLPMAILLHADGKYATKAMDATVT 200
            .  .....||.||.|..:|||...::..|:||||:|||..|..|:|.||        |..:||||
Yeast   166 KKGGKPYFIPCTPYGCMKLLEEAHVKLDGKNAVVLGRSSIVGNPIASLL--------KNANATVT 222

  Fly   201 ICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ESTGQFKLVGD 263
            :||.:|  :.:|....||||::.|.|.|..:..|.:|.||.|||||||.:.|  :.:|| |||||
Yeast   223 VCHSHT--RNIAEVVSQADIVIAACGIPQYVKSDWIKEGAVVIDVGINYVPDISKKSGQ-KLVGD 284

  Fly   264 VDFEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARKQF 303
            |||:.|::...:||||||||||||||||:.|.|.||::||
Yeast   285 VDFDSVKEKTSYITPVPGGVGPMTVAMLVSNVLLAAKRQF 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 7..302 CDD:439960 132/297 (44%)
MIS1NP_009640.1 FolD 37..323 CDD:439960 132/297 (44%)
FTHFS 345..975 CDD:460143
Blue background indicates that the domain is not in the aligned region.

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