DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdmc and EMB3127

DIOPT Version :9

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_191971.1 Gene:EMB3127 / 825824 AraportID:AT4G00620 Length:360 Species:Arabidopsis thaliana


Alignment Length:298 Identity:136/298 - (45%)
Similarity:194/298 - (65%) Gaps:15/298 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AQIIDGKAIAQEVRTQLAHELKGMEAAGYPKPHLTAVIVGEDPASEKYVANKMVACREVGISSET 72
            |.:|||||:|:::|.::..|:..|:.:....|.|..::||:...|..||.||..||..|||.|..
plant    69 AIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGDRKDSATYVRNKKKACDSVGIKSFE 133

  Fly    73 KRLPASTTQEELLQLIADLNKDPQVTGILVQLPVPEHINERTICNAVDVDKDVDGFNEVNIGRTA 137
            .||...:::||:|:.::..|.||.|.|||||||:|.|::|:.|.|||.::||||||:.:||||.|
plant   134 VRLAEDSSEEEVLKSVSGFNDDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLA 198

  Fly   138 LDMEAN--IPATPLGVKRLLEHMKIETLGRNAVVVGRSKNVSLPMAILLHADGKYATKAMDATVT 200
            :.....  :|.||.|...||....||..|:.|||:|||..|.:|.|:||..:        ||||:
plant   199 MRGREPLFVPCTPKGCIELLHRYNIEIKGKRAVVIGRSNIVGMPAALLLQRE--------DATVS 255

  Fly   201 ICHRYTP-PKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKDESTGQ-FKLVGD 263
            |.|..|. |:|:.   |:||||:.|||:|.::....:||||.:||||||.::|.|..: ::||||
plant   256 IIHSRTKNPEEIT---READIIISAVGQPNMVRGSWIKPGAVLIDVGINPVEDPSAARGYRLVGD 317

  Fly   264 VDFEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARK 301
            :.:||..:||..||||||||||||:|||:.|||.:|::
plant   318 ICYEEASKVASAITPVPGGVGPMTIAMLLSNTLTSAKR 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 9..304 CDD:223268 135/297 (45%)
THF_DHG_CYH 10..126 CDD:279147 49/115 (43%)
THF_DHG_CYH_C 129..303 CDD:280955 82/177 (46%)
EMB3127NP_191971.1 PLN02616 1..360 CDD:215332 136/298 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 108 1.000 Domainoid score I2149
eggNOG 1 0.900 - - E1_COG0190
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I1035
OMA 1 1.010 - - QHG61254
OrthoDB 1 1.010 - - D1004679at2759
OrthoFinder 1 1.000 - - FOG0001810
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100216
Panther 1 1.100 - - LDO PTHR48099
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1169
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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