DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdmc and AT4G00600

DIOPT Version :10

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_191969.1 Gene:AT4G00600 / 825813 AraportID:AT4G00600 Length:310 Species:Arabidopsis thaliana


Alignment Length:302 Identity:121/302 - (40%)
Similarity:175/302 - (57%) Gaps:51/302 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TSNMAQIIDGKAIAQEVRTQLAHELKGMEAAGYPKPHLTAVIVGEDPASEKYVANKMVACREVGI 68
            :|..|.:|||||.|:::|..:..|:..|:.:           :|..||.:               
plant    51 SSPSAIVIDGKAEAKKIRDDIKIEVSRMKES-----------IGVVPAED--------------- 89

  Fly    69 SSETKRLPASTTQEELLQLIADLNKDPQVTGILVQLPVPEHINERTICNAVDVDKDVDGFNEVNI 133
                      :::||:|:.::..|.||.|.|:|||||:|.|::|:.|.|||.::||||||:.:||
plant    90 ----------SSEEEVLKYVSGFNDDPSVHGVLVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNI 144

  Fly   134 GRTALDMEAN--IPATPLGVKRLLEHMKIETLGRNAVVVGRSKNVSLPMAILLHADGKYATKAMD 196
            ||.|:.....  :|.||.|...||....||..|:.|||:|||..|.:|.|:||..:        |
plant   145 GRLAMRGREPLFVPCTPKGCIELLHRYNIEFKGKRAVVIGRSNIVGMPAALLLQKE--------D 201

  Fly   197 ATVTICH-RYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKDES-TGQFK 259
            |||:|.| |...|:||.   |||||::.|||||.::....:||||.:|||||..::|.| .|..:
plant   202 ATVSIIHSRTMNPEELT---RQADILISAVGKPNMVRGSWIKPGAVLIDVGIKPVEDPSAAGGER 263

  Fly   260 LVGDVDFEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARK 301
            ||||:.:.|..::|..||||||.|||||:|||:.|||.:|::
plant   264 LVGDICYVEASKIASAITPVPGDVGPMTIAMLLSNTLTSAKR 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 7..302 CDD:439960 120/299 (40%)
AT4G00600NP_191969.1 PLN02616 1..310 CDD:215332 121/302 (40%)

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