DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdmc and AT2G38660

DIOPT Version :9

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001118472.1 Gene:AT2G38660 / 818448 AraportID:AT2G38660 Length:352 Species:Arabidopsis thaliana


Alignment Length:305 Identity:134/305 - (43%)
Similarity:184/305 - (60%) Gaps:17/305 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TSNMAQIIDGKAIAQEVRTQLAHELKGMEAAGYPKPHLTAVIVGEDPASEKYVANKMVACREVGI 68
            |.....:|||..||:|:||::..|:..|:.|....|.|..|:|||...|:.||.||:.||.|.||
plant    59 TEQKTVVIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVGEQRDSQTYVRNKIKACEETGI 123

  Fly    69 SSETKRLPASTTQEELLQLIADLNKDPQVTGILVQLPVPEHINERTICNAVDVDKDVDGFNEVNI 133
            .|....||...|:.:::.::...|:|..:.|||||||:|:|:||..|.|.|.::||||||:.:|:
plant   124 KSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLPQHLNESKILNMVRLEKDVDGFHPLNV 188

  Fly   134 GRTALDMEANIP----ATPLGVKRLLEHMKIETLGRNAVVVGRSKNVSLPMAILLHADGKYATKA 194
            |..|  |....|    .||.|...||....:|..|:||||:|||..|.|||::||        :.
plant   189 GNLA--MRGREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSNIVGLPMSLLL--------QR 243

  Fly   195 MDATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKDESTG-QF 258
            .||||:..|.:|  |:.....|:|||::.|.|.|.|:....:||||.|||||...::|.|.. .:
plant   244 HDATVSTVHAFT--KDPEHITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCEFGY 306

  Fly   259 KLVGDVDFEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARKQF 303
            :|||||.:||...||..||||||||||||:.||:.|||:||::.|
plant   307 RLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLEAAKRIF 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 9..304 CDD:223268 133/300 (44%)
THF_DHG_CYH 10..126 CDD:279147 49/115 (43%)
THF_DHG_CYH_C 129..303 CDD:280955 79/178 (44%)
AT2G38660NP_001118472.1 PLN02897 8..352 CDD:178485 134/305 (44%)
THF_DHG_CYH 65..181 CDD:279147 49/115 (43%)
NAD_bind_m-THF_DH_Cyclohyd 177..348 CDD:133448 84/182 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 108 1.000 Domainoid score I2149
eggNOG 1 0.900 - - E1_COG0190
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I1035
OMA 1 1.010 - - QHG61254
OrthoDB 1 1.010 - - D1004679at2759
OrthoFinder 1 1.000 - - FOG0001810
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48099
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1169
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.940

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