DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nmdmc and mthfd2l

DIOPT Version :10

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:XP_005167203.2 Gene:mthfd2l / 327496 ZFINID:ZDB-GENE-030131-5707 Length:383 Species:Danio rerio


Alignment Length:297 Identity:151/297 - (50%)
Similarity:205/297 - (69%) Gaps:0/297 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NMAQIIDGKAIAQEVRTQLAHELKGMEAAGYPKPHLTAVIVGEDPASEKYVANKMVACREVGISS 70
            ::|.::.|..:|:::..::..::..:.|.|..:|||:.::||:|.||..||.||......:|:||
Zfish    49 HVATVVSGAELARQIHKEVQSDIAKLVAEGNRRPHLSVILVGDDHASHTYVRNKTRTASLLGMSS 113

  Fly    71 ETKRLPASTTQEELLQLIADLNKDPQVTGILVQLPVPEHINERTICNAVDVDKDVDGFNEVNIGR 135
            .|...|:|.:|||:|:||...|:|..::|:|||||:|||||||.|||||..:||||||:.||||:
Zfish   114 STIFRPSSVSQEEMLELIDKFNRDRNISGLLVQLPLPEHINERAICNAVAPEKDVDGFHIVNIGK 178

  Fly   136 TALDMEANIPATPLGVKRLLEHMKIETLGRNAVVVGRSKNVSLPMAILLHADGKYATKAMDATVT 200
            ..||....||||...|..::....:||:|:|.:||||||||.:|:|:|||:|.|:.....||||.
Zfish   179 LCLDQRCMIPATAAAVWEIIRRTGLETVGKNVLVVGRSKNVGMPIAMLLHSDRKHERSGGDATVI 243

  Fly   201 ICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKDESTGQFKLVGDVD 265
            :.||.||...|....|.|||::.|.|.|.|||.||||.||.||||||||::|..||:.:||||||
Zfish   244 MAHRCTPLPRLKELARLADIVIAAAGVPHLITADMVKEGAAVIDVGINRMQDPVTGKSRLVGDVD 308

  Fly   266 FEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARKQ 302
            ||.|::.||.||||||||||||:|||..|||....|:
Zfish   309 FEAVKEKAGFITPVPGGVGPMTIAMLQANTLVTEEKK 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 7..302 CDD:439960 150/294 (51%)
mthfd2lXP_005167203.2 None

Return to query results.
Submit another query.