DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdmc and dao-3

DIOPT Version :9

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_509362.1 Gene:dao-3 / 181065 WormBaseID:WBGene00000929 Length:303 Species:Caenorhabditis elegans


Alignment Length:318 Identity:119/318 - (37%)
Similarity:176/318 - (55%) Gaps:38/318 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MAQIIDGKAIAQEVRTQLAHELKGMEAA----GYPKPH--LTAVIVGEDPASEKYVANKMVACRE 65
            :|:|:.|...:::|    .|:: |.:.|    .:|..|  |..|.||....|..|:.:|:...:|
 Worm     2 VAEIVSGLEYSKKV----LHDV-GQKIAKTREHHPNFHAVLAIVQVGNRSDSNVYINSKLKKAKE 61

  Fly    66 VGISSETKRLPASTTQEELLQLIADLNKDPQVTGILVQLPV--PEHINERTICNAVDVDKDVDGF 128
            :|...:..:||.:.||.:|.:.|..||.|.::.||::|||:  ...|:..::.:.:|..|||||.
 Worm    62 IGADGKLIKLPDTITQGDLKREIMALNHDNEIDGIIIQLPLDCKHEIDADSVIDLIDPLKDVDGL 126

  Fly   129 NEVNIGRTAL-DMEANI-PATPLGVKRLLEHMKIE---TLGRNAVVVGRSKNVSLPMAILL--HA 186
            ..:|.||.|. :::..| |.||.|...|::....:   ..|:..||:||||.|..|.|.|.  | 
 Worm   127 TRINAGRLARGELQRTIFPCTPFGCLYLVQQATGDANFVSGKEVVVLGRSKIVGSPAAALFLWH- 190

  Fly   187 DGKYATKAMDATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIK 251
                     ..||||||..||  .|...|.:|||::||:|:...:..|.:||||.|||.||| :.
 Worm   191 ---------HGTVTICHSKTP--NLKEKCLRADILIVAIGRKHFVKADWIKPGAFVIDCGIN-VG 243

  Fly   252 DESTGQFKLVGDVDFEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARK----QFDD 305
            |:...: |:.||||.|..::|||.:|||||||||||||||:.||.:.|::    |.||
 Worm   244 DDPNSR-KIYGDVDTEAAKEVAGFLTPVPGGVGPMTVAMLIRNTFEQAKRRRLGQKDD 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 9..304 CDD:223268 116/313 (37%)
THF_DHG_CYH 10..126 CDD:279147 35/123 (28%)
THF_DHG_CYH_C 129..303 CDD:280955 77/184 (42%)
dao-3NP_509362.1 FolD 5..294 CDD:223268 115/307 (37%)
THF_DHG_CYH 5..124 CDD:279147 35/123 (28%)
NAD_bind_m-THF_DH_Cyclohyd 119..291 CDD:133448 81/185 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I2740
Isobase 1 0.950 - 0 Normalized mean entropy S1545
OMA 1 1.010 - - QHG61254
OrthoDB 1 1.010 - - D1004679at2759
OrthoFinder 1 1.000 - - FOG0001810
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100216
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4671
SonicParanoid 1 1.000 - - X1169
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.820

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