DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdmc and K07E3.4

DIOPT Version :9

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_509360.1 Gene:K07E3.4 / 181064 WormBaseID:WBGene00019492 Length:640 Species:Caenorhabditis elegans


Alignment Length:288 Identity:53/288 - (18%)
Similarity:98/288 - (34%) Gaps:84/288 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LTAVIVGEDPASEKYVANKMVACREVGISSETKRLPASTTQEELLQLIADLNKDPQVTGILVQLP 105
            :..:::|.|.|.....|:      ::|::.....|...|.:..|:|.:..               
 Worm   289 IARIVIGSDKAGNPVTAD------DIGVTGALTVLMRDTVRPNLMQTLEG--------------- 332

  Fly   106 VPEHINERTICN------AVDVDK------DVDGF--NEVNIGRTALDMEANIPATPLGVKRLLE 156
            .|..::.....|      ::..||      ..|||  .|...|            ..:|:::...
 Worm   333 TPVFVHAGPFANIAHGQSSILADKVALKLAGPDGFVITEAGFG------------ADIGMEKFFN 385

  Fly   157 -HMKIETLGRNAVVVGRSKNVSLPMAILLHADGKYATKAMDATVTICHRYTPPKELARHCRQADI 220
             ..:...|..:|||:     |:...|:.:|..|    .::.|...:.|.|.          ..:|
 Worm   386 IKCRYSGLQPSAVVL-----VATVRALKMHGGG----PSVVAGAPLKHEYL----------DENI 431

  Fly   221 IVVAVGKPGLITKDMV---KPGACVIDVGINRIKDESTGQFKLV-------GDVDFEEVRQVAGH 275
            .:|..|....:.|.:.   |.|..|: |.:|:...::..:.:||       |..|    ..|:.|
 Worm   432 PLVEGGCDSNLRKQIENANKFGIPVV-VCVNKFATDTDKELELVCSKAKEYGAFD----AVVSEH 491

  Fly   276 ITPVPGGVGPMTVAMLMHNTLKAARKQF 303
            .:  .||.|.:.:|..:.|......|||
 Worm   492 WS--QGGAGAVALANSLVNATTGHPKQF 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 9..304 CDD:223268 53/288 (18%)
THF_DHG_CYH 10..126 CDD:279147 13/96 (14%)
THF_DHG_CYH_C 129..303 CDD:280955 35/184 (19%)
K07E3.4NP_509360.1 PLN02759 13..640 CDD:178359 53/288 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100216
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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