DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmdmc and mthfd2l

DIOPT Version :9

Sequence 1:NP_476929.1 Gene:Nmdmc / 47895 FlyBaseID:FBgn0010222 Length:309 Species:Drosophila melanogaster
Sequence 2:XP_002941814.2 Gene:mthfd2l / 100497864 XenbaseID:XB-GENE-6076442 Length:353 Species:Xenopus tropicalis


Alignment Length:301 Identity:164/301 - (54%)
Similarity:215/301 - (71%) Gaps:0/301 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRFTSNMAQIIDGKAIAQEVRTQLAHELKGMEAAGYPKPHLTAVIVGEDPASEKYVANKMVACRE 65
            ::.|.:.|.||.|..:|:|::.::..|::...:.|..:|||:.::||::|||..||.||:.|...
 Frog    50 LQTTRSKATIISGTKLAKEIQREVQKEVETWLSLGNRRPHLSVILVGDNPASHTYVKNKIKAATS 114

  Fly    66 VGISSETKRLPASTTQEELLQLIADLNKDPQVTGILVQLPVPEHINERTICNAVDVDKDVDGFNE 130
            ||||||....|:..::||||.:|:.|:.|..|:|:|||||:|||||||.|||||..:||||||:.
 Frog   115 VGISSEVILKPSKISEEELLDVISKLSNDSSVSGLLVQLPLPEHINERAICNAVVPEKDVDGFHI 179

  Fly   131 VNIGRTALDMEANIPATPLGVKRLLEHMKIETLGRNAVVVGRSKNVSLPMAILLHADGKYATKAM 195
            |||||..||..:.||||...|..:::...|||.|:|.||.||||||.:|:::|||.||::.....
 Frog   180 VNIGRLCLDQWSIIPATAAAVWEIIKRTGIETFGKNVVVAGRSKNVGMPISMLLHTDGRHERPGG 244

  Fly   196 DATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKDESTGQFKL 260
            ||||||.|||||...|..|.:.||||:||.|.|.|||.||:|.||.|||||||.|:|..||:..:
 Frog   245 DATVTITHRYTPKDLLKSHTQLADIIIVAAGIPKLITSDMIKEGATVIDVGINHIEDPVTGKTII 309

  Fly   261 VGDVDFEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARK 301
            |||||||.|::.||.||||||||||||||||:.|||.||:|
 Frog   310 VGDVDFEGVKEKAGFITPVPGGVGPMTVAMLLKNTLLAAKK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmdmcNP_476929.1 FolD 9..304 CDD:223268 162/293 (55%)
THF_DHG_CYH 10..126 CDD:279147 55/115 (48%)
THF_DHG_CYH_C 129..303 CDD:280955 103/173 (60%)
mthfd2lXP_002941814.2 FolD 58..350 CDD:223268 161/291 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 211 1.000 Domainoid score I2747
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 344 1.000 Inparanoid score I2270
OMA 1 1.010 - - QHG61254
OrthoDB 1 1.010 - - D1004679at2759
OrthoFinder 1 1.000 - - FOG0001810
OrthoInspector 1 1.000 - - otm48943
Panther 1 1.100 - - LDO PTHR48099
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4671
SonicParanoid 1 1.000 - - X1169
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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