Protein Alignment hbn and RLT2

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_199231.1
• Gene: RLT2 / 834441
• AraportID: AT5G44180
• Length: 1694
• Species: Arabidopsis thaliana
• Alignment Length: 293
• Identity: 69/293 - (23%)
• Similarity: 100/293 - (34%)
• Gaps: 109/293 - (37%)

  Fly   154 RRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKR------- 211
            :..|...|..||..||..:....||....|.||:::|:||:.::|:||.:||.|.||.
plant    18 KSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERKSTTPSKRQ 82

  Fly   212 ---------------------------------------------EKFMNQDKA-----GYL--- 223
                                                         .:|.....|     ||:
plant    83 RKELVTPTAMESWEPPVNAGDLVAGNELDSRRAARGSGGSGVTVVRRFNEPSSAEVRAIGYVEAQ 147

  Fly   224 LPEQGLPEFP-LGI---PLPPHGLPGHPGSMQSEFWPPH-FALHQHFNPAAAAAAGLLP------ 277
            |.|:.....| ||:   |||| |..|.|..|     |.| .|..|.|.......:.:.|
plant   148 LGERLRDNGPVLGMEFDPLPP-GAFGMPIEM-----PSHRKATRQAFETNIYVRSDVKPIKDHVR 206

  Fly   278 ---QHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGY-------PQ----NLSL 328
               ::...|  :||:..|..|:.:..|:..|:...|:....:|.|||:       ||    ||:.
plant   207 PIREYQFIP--ELPSSRTDHSERVSPSHHFGVPLDGSVMRVSAVSAGHRDDYKISPQIPNLNLAT 269

  Fly   329 HAGLSAMSQVSPPCSNSSPRE--SPKLVPHPTP 359
            |.|              .|..  ||.||.:.:|
plant   270 HQG--------------KPGHVYSPNLVEYDSP 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	20/55 (36%)
RLT2	NP_199231.1	Homeodomain	18..74	CDD:459649	20/55 (36%)
		DUF5401	<322..>457	CDD:375164
		DDT	515..570	CDD:460696
		HARE-HTH	696..765	CDD:461541
		WHIM1	899..941	CDD:464774
		WSD	1071..1145	CDD:464775