Protein Alignment hbn and HB40

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_001329011.1
• Gene: HB40 / 829827
• AraportID: AT4G36740
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 106
• Identity: 30/106 - (28%)
• Similarity: 47/106 - (44%)
• Gaps: 26/106 - (24%)

  Fly   106 QQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLER 170
            :|..:.:.|.:.|..:.|||              ||     :.|.||:       |..|::.||.
plant    32 KQPKRRRKKTKGSVASADGG--------------NG-----LFRKRKL-------TDEQVNMLEM 70

  Fly   171 AFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKR 211
            :|......:...::.||..|.|...:|.||||||||:|:.:
plant    71 SFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNK 111

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	19/55 (35%)
HB40	NP_001329011.1	HOX	56..109	CDD:197696	21/59 (36%)