DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and RHOXF2B

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001093155.1 Gene:RHOXF2B / 727940 HGNCID:33519 Length:288 Species:Homo sapiens


Alignment Length:267 Identity:62/267 - (23%)
Similarity:94/267 - (35%) Gaps:106/267 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GHPHHIHHLH---SSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLD 127
            |.|.|:...:   :|.|:|:...|.|.:::..||.                   ..|....|||:
Human    84 GVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQY-------------------SRPQGAVGGLE 129

  Fly   128 VDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 192
            ..|..:     .|.|                .||..||.:||..|::.|:|..|.|..||..:::
Human   130 PGNAQQ-----PNVH----------------AFTPLQLQELECIFQREQFPSEFLRRRLARSMNV 173

  Fly   193 SEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQG----------------------------- 228
            :|..||:||:|||||||:.::.:   .|..:||...                             
Human   174 TELAVQIWFENRRAKWRRHQRAL---MARNMLPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWD 235

  Fly   229 ----------LPEF-PLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMA 282
                      :|.| |..:|||...||..|.:.|:||.|..|                    ::.
Human   236 HSHSSSLCFPMPPFPPPSLPLPLMLLPPMPPAGQAEFGPFPF--------------------VIV 280

  Fly   283 PHYKLPN 289
            |.:..||
Human   281 PSFTFPN 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 23/52 (44%)
RHOXF2BNP_001093155.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..136 15/75 (20%)
Homeobox 140..190 CDD:278475 23/49 (47%)
Nuclear localization signal. /evidence=ECO:0000250 186..195 5/8 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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