DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and SHOX

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens


Alignment Length:324 Identity:97/324 - (29%)
Similarity:129/324 - (39%) Gaps:105/324 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVLITHPHHGH-PHHIHHLHSSNSNGSNHLSHQ 88
            |.||.::|.|.:.:.|..|.:              ||. ..|| |.|:...|..|..        
Human    38 VLESGLARSRELGTSDSSLQD--------------ITE-GGGHCPVHLFKDHVDNDK-------- 79

  Fly    89 QQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKV 153
                 .:.:.....:..:...:.:.|||          ||.::||            |.:...|.
Human    80 -----EKLKEFGTARVAEGIYECKEKRE----------DVKSEDE------------DGQTKLKQ 117

  Fly   154 RRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQD 218
            |||||.||..||::|||.|::|.|||.|.||:|:.||.||||||||||||||||.||:|   ||.
Human   118 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQE---NQM 179

  Fly   219 KAGYLLPEQGLPEFPLGIPLPPHGLPGH-----------PGSMQSEFWPPHFAL--------HQH 264
            ..|.:|                 |...|           .|:::..|......|        |.|
Human   180 HKGVIL-----------------GTANHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPH 227

  Fly   265 FNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSL 328
            .:|..||.|    .:||.|.   |.|        ||...:....|.|||..|||:....:|.|:
Human   228 LHPHLAAHA----PYLMFPP---PPF--------GLPIASLAESASAAAVVAAAAKSNSKNSSI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 39/55 (71%)
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 9/40 (23%)
Homeodomain 118..174 CDD:459649 39/55 (71%)
SH3-binding. /evidence=ECO:0000255 242..249 4/17 (24%)
OAR 272..288 CDD:461067 2/5 (40%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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