Protein Alignment hbn and Sebox

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_076441.1
• Gene: Sebox / 58922
• RGDID: 62077
• Length: 188
• Species: Rattus norvegicus
• Alignment Length: 191
• Identity: 63/191 - (32%)
• Similarity: 82/191 - (42%)
• Gaps: 42/191 - (21%)

  Fly   154 RRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQD 218
            ||.||||:..||.:|||.|....|||:.|||.||....|.||::||||||||||..|..|....:
  Rat    19 RRKRTTFSVGQLLELERVFAARPYPDISTREHLAQITHLPEAKIQVWFQNRRAKRIKDRKPGALN 83

  Fly   219 KAGYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQ-HLMA 282
            ....|.|...||:.| .:...| |.|.||               .|...:|...:...|| ..:|
  Rat    84 ARLELPPNCSLPDTP-QLSWDP-GTPSHP---------------LHSTSSAQQTSACPPQTSCLA 131

  Fly   283 PHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMSQVSPPCS 343
            |                      |.|.|.:.:.|.|:|  |...|..:|:.::.|:.|..|
  Rat   132 P----------------------ILGPGQSWSGAKAAA--PWGTSEVSGVHSLEQIVPQTS 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	33/55 (60%)
Sebox	NP_076441.1	COG5576	<13..121	CDD:227863	47/118 (40%)
		Homeodomain	19..72	CDD:459649	31/52 (60%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	80..125		12/61 (20%)