Protein Alignment hbn and otpa

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_001122175.1
• Gene: otpa / 560759
• ZFINID: ZDB-GENE-070216-1
• Length: 332
• Species: Danio rerio
• Alignment Length: 347
• Identity: 102/347 - (29%)
• Similarity: 135/347 - (38%)
• Gaps: 128/347 - (36%)

  Fly    78 NSNGSNH-----LSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSS 137
            ||.|||.     .|..|::|..|||:.:|...||.|
Zfish    77 NSAGSNPPGVAVNSKDQEKQQQQQQNPTQSSSQQSQ----------------------------- 112

  Fly   138 LNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQ 202
                          |.:|.||.||..||::|||:|.||.|||:|.||:||:|:.|:|:|||||||
Zfish   113 --------------KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQ 163

  Fly   203 NRRAKWRKREKFMNQDKA-GYLLP-EQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHF 265
            ||||||:||:|..|..:| |.||| ..|||:|
Zfish   164 NRRAKWKKRKKTTNVFRAPGTLLPTHHGLPQF--------------------------------- 195

  Fly   266 NPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHA 330
             |:|||||..:...|.       :||                 |.....|||...|..| |.|..
Zfish   196 -PSAAAAAAAMGDSLC-------SFH-----------------ANDTRWAAAGMPGVSQ-LQLPP 234

  Fly   331 GL---SAMSQVSPPCSNSSPRESPKLVPHPTPPHATPPAGGNGGGGLLT-------GGLISTAAQ 385
            .|   .||:|....||         |...|.|...:.....:.|.||.:       .|::..:..
Zfish   235 ALGRQQAMAQSLSQCS---------LGAGPPPNSMSLSNMSSNGSGLQSHLYQPTFPGMVPASLS 290

  Fly   386 SPNSAAGASSNASTPVSVVTKG 407
            .|.:..|:....|:|.:.|.:|
Zfish   291 GPTNVTGSPQLCSSPDTDVWRG 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	37/55 (67%)
otpa	NP_001122175.1	Homeodomain	116..166	CDD:459649	32/49 (65%)
		OAR	310..327	CDD:461067	1/3 (33%)