DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Rhox12

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001020254.1 Gene:Rhox12 / 382282 MGIID:2685994 Length:186 Species:Mus musculus


Alignment Length:120 Identity:44/120 - (36%)
Similarity:61/120 - (50%) Gaps:34/120 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GLDVDNDD-----ELSSSLNNGHDLSD----------------------MERPRKVRRSRTT--- 159
            |:..|.||     ||.   |.|:|:.|                      ..|..:|||:|..   
Mouse    54 GIPDDKDDVIYVGELK---NIGNDIKDECHGSHQGSGDPQPEEKQKNSAAARVPQVRRTRPRIQL 115

  Fly   160 -FTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREK 213
             ||..||::||..||||:|||..||::||..|.|:|::||.||:.|||.:||.::
Mouse   116 GFTPRQLNELEDFFEKTKYPDALTRKNLAKHLYLAESKVQRWFKKRRAHYRKEQQ 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 30/59 (51%)
Rhox12NP_001020254.1 homeodomain 107..169 CDD:238039 32/61 (52%)

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