DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and CG9876

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_611756.1 Gene:CG9876 / 37668 FlyBaseID:FBgn0034821 Length:275 Species:Drosophila melanogaster


Alignment Length:307 Identity:89/307 - (28%)
Similarity:117/307 - (38%) Gaps:111/307 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 QQQQHS-------------------QQQHHSQQQQQQQQLQVQAKREDSPTNTD--GGLDVDN-- 130
            |||.||                   ...|.|...:.:.:|:   .||:|..|.|  ....|||  
  Fly     5 QQQLHSLPVGNPGNFYYGPTVSGEIYSSHQSHNLESEDKLE---DREESGRNLDKIHRFSVDNIM 66

  Fly   131 ---DD---------ELSSSLN-NGHDLSDMERP---------------RKVRRSRTTFTTFQLHQ 167
               .|         ||||:.. .|......:||               ||.||:||||::.||..
  Fly    67 EMKHDAYSKGKMAMELSSNFGPTGAGCGGADRPAPCSGNLPAGGGHHSRKPRRNRTTFSSAQLTA 131

  Fly   168 LERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQ----DKAGYLLPEQG 228
            ||:.||:|.|||.|.||:||.::.||||||||||||||||:|:.|:.:..    |.|..|:|.  
  Fly   132 LEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRNERSVGSRTLLDTAPQLVPA-- 194

  Fly   229 LPEFPLGIPL-----PPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLP 288
                |:...:     .||..|..|        ||..|...:|.|..                   
  Fly   195 ----PISNNMHKYANMPHPHPQPP--------PPPGAYALNFGPLE------------------- 228

  Fly   289 NFHTLLSQYMGLSNLNGIFGAGAAAAAAAAS----------AGYPQN 325
                 |......:|..|.||:..|:.:...|          |.|.:|
  Fly   229 -----LRSCQNYTNCYGGFGSSGASGSGVCSFFGATNYCVAANYAKN 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 35/52 (67%)
CG9876NP_611756.1 Homeobox 121..173 CDD:278475 35/51 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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