DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hbn and arxa

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_571459.1 Gene:arxa / 30657 ZFINID:ZDB-GENE-990415-15 Length:453 Species:Danio rerio


Alignment Length:450 Identity:137/450 - (30%)
Similarity:179/450 - (39%) Gaps:143/450 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 YSIDQILGNQ-----HQIKRSDTPSEVLITHPHHG----------------H-PHHIHHLH---- 75
            |.||.|||.:     .|:.....|:.|   .|.|.                | |..:..|:    
Zfish    26 YCIDSILGRRSPCKVRQLGAQSLPAPV---RPDHEMTTEVTSKENSFDSDMHLPPKLRRLYGPGG 87

  Fly    76 ---SSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQV---QAKREDSP-TNTDGGLDVDN--- 130
               .|......||...::::...|...|.:..|..|:.:   ::.||::| :.:|.|...::   
Zfish    88 KYLDSGRGFHEHLEKGERERLLDQACESLKISQAPQVSISRSKSYRENAPFSQSDEGQSPEHMAQ 152

  Fly   131 ---------------------DDELS----SSLNNGHDLSDME---------------RPRKVRR 155
                                 |:.||    .||:|..|:.|.|               ..||.||
Zfish   153 ELVELSTLKFEEDVVKEEACGDNSLSPKDEESLHNDGDVKDGEDSVCLSAGSDSEEGMLKRKQRR 217

  Fly   156 SRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKA 220
            .|||||::||.:|||||:||.||||||||:|||||||:||||||||||||||||||||       
Zfish   218 YRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREK------- 275

  Fly   221 GYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWP----PHFALHQHFNPAAAAAA---GLLPQ 278
                  .|:...|.|:|.|......||.|...|..|    ||.||...:..||||||   ||.|.
Zfish   276 ------AGVQAHPTGLPFPGPLAAAHPLSHYLEGGPFPPHPHPALESAWTAAAAAAAAFPGLAPP 334

  Fly   279 HLMAPHYKLPNFHTL-------LSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMS 336
                     ||...|       |..::|.:........|.......:|.|...:.|..|.|  :.
Zfish   335 ---------PNSSALPPATPLGLGTFLGTAMFRHPAFIGPTFGRLFSSMGPLTSASTAAAL--LR 388

  Fly   337 QVSPPCSNSSPRESPKLVPHPTPPHAT---PPAGGNGGGGLLTGGLISTAAQSPNSAAGA 393
            |.:||            |..|..|.|.   ||:..:           ||||....|:..|
Zfish   389 QTAPP------------VESPVQPSAALPEPPSSSS-----------STAADRRASSIAA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 43/52 (83%)
arxaNP_571459.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..75 4/28 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..149 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..212 9/41 (22%)
Homeobox 219..271 CDD:278475 43/51 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 390..418 12/50 (24%)
OAR 417..434 CDD:281777 1/8 (13%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 421..434 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3639
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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