DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and otpb

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_571175.1 Gene:otpb / 30316 ZFINID:ZDB-GENE-990708-7 Length:328 Species:Danio rerio


Alignment Length:334 Identity:99/334 - (29%)
Similarity:134/334 - (40%) Gaps:107/334 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 SNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNG 141
            ||.||...::.:.|::..||..:....||.||                                 
Zfish    79 SNPNGMQQVNAKDQEKQQQQNSNQTGGQQNQQ--------------------------------- 110

  Fly   142 HDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRA 206
                      |.:|.||.||..||::|||:|.||.|||:|.||:||:|:.|:|:|||||||||||
Zfish   111 ----------KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRA 165

  Fly   207 KWRKREKFMNQDKA-GYLLPEQGLPEFPLGIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAA 270
            ||:||:|..|..:| |.|||..|||:|       |.......|.....|         |.|....
Zfish   166 KWKKRKKTTNVFRAPGTLLPTHGLPQF-------PSAAAAAMGDSLCSF---------HANDTRW 214

  Fly   271 AAAGLLP--QHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLS 333
            |||| :|  ..|..|    |:.....:....||..:  .|||..          |.|:.|...||
Zfish   215 AAAG-MPGVSQLQIP----PSLGRQQAMAQSLSQCS--LGAGPP----------PNNMGLSGSLS 262

  Fly   334 AMSQVSPPCSNSSPRESPKLVPHPTPPHATPPAGGNGGGGLLTGGLISTAAQSPNSAAGASSNAS 398
                     ||.|..:|.  :..||.|                 |::..:...|.:..|:....|
Zfish   263 ---------SNGSGLQSH--LYQPTFP-----------------GMVPASLSGPTNVTGSPQLCS 299

  Fly   399 TPVSVVTKG 407
            :|.|.:.:|
Zfish   300 SPDSDMWRG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 37/55 (67%)
otpbNP_571175.1 Homeodomain 114..164 CDD:459649 32/49 (65%)
OAR 305..323 CDD:461067 1/4 (25%)

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