Protein Alignment hbn and Otp

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_001093993.1
• Gene: Otp / 294640
• RGDID: 727945
• Length: 325
• Species: Rattus norvegicus
• Alignment Length: 305
• Identity: 96/305 - (31%)
• Similarity: 128/305 - (41%)
• Gaps: 89/305 - (29%)

  Fly   109 LQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFE 173
            |.|.||..|......||             .|.......:..:|.:|.||.||..||::|||:|.
  Rat    73 LAVSAKDPDKQPGPQGG-------------PNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFA 124

  Fly   174 KTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKA-GYLLPEQGLPEFPLGIP 237
            ||.|||:|.||:||:|:.|:|:|||||||||||||:||:|..|..:| |.|||..|||:||
  Rat   125 KTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPGLPQFP---- 185

  Fly   238 LPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSN 302
                                         .||||||..:...|.       :||
  Rat   186 -----------------------------SAAAAAAAAMGDSLC-------SFH----------- 203

  Fly   303 LNGIFGAGAAAAAAAASAGYPQNLSLHAGL---SAMSQVSPPCSNSSPRESPKLVPHPTPPHATP 364
                  |.....||||..|..| |.|...|   .||:|....||.::.       |.|.....:.
  Rat   204 ------ANDTRWAAAAMPGVSQ-LPLPPALGRQQAMAQSLSQCSLAAG-------PPPNSMGLSN 254

  Fly   365 PAGGNGGGGLLT-------GGLISTAAQSPNSAAGASSNASTPVS 402
            ...|:.|.||.:       .|::..:...|::.:|:....|:|.|
  Rat   255 SLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDS 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	37/55 (67%)
Otp	NP_001093993.1	Homeodomain	106..156	CDD:459649	32/49 (65%)
		OAR	303..320	CDD:461067