DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and sebox

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001306981.1 Gene:sebox / 282666 ZFINID:ZDB-GENE-021206-4 Length:293 Species:Danio rerio


Alignment Length:91 Identity:42/91 - (46%)
Similarity:52/91 - (57%) Gaps:8/91 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 DVDNDDELSSSL--NNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMR 189
            ||.....|||..  ..||    :|..||  |.||.|:..||.:|||||..|.|||:..||.||..
Zfish    36 DVTTKHMLSSPELDRTGH----VEGQRK--RKRTIFSRAQLSELERAFMITPYPDITLRERLAAL 94

  Fly   190 LDLSEARVQVWFQNRRAKWRKREKFM 215
            ..|.|:::|||||||||:..|.:|.:
Zfish    95 TLLPESKIQVWFQNRRARSMKSKKLI 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 29/52 (56%)
seboxNP_001306981.1 COG5576 13..159 CDD:227863 42/91 (46%)
Homeobox 61..112 CDD:278475 28/50 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..144 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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