DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Drgx

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_665710.2 Gene:Drgx / 252880 RGDID:628616 Length:263 Species:Rattus norvegicus


Alignment Length:240 Identity:83/240 - (34%)
Similarity:111/240 - (46%) Gaps:33/240 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 DLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAK 207
            |..|....||.||:|||||..||..||..|.:|.||||||||:|||:::|:||||||||||||||
  Rat    23 DFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAK 87

  Fly   208 WRKREKFMNQDKAGYLLPEQGLPEFPL-GIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAA 271
            |||.|:..:..:.|...|...:...|: .|..||   ||.....:.|......:|.:...||...
  Rat    88 WRKTERGASDQEPGAKEPMAEVTPPPVRNINSPP---PGDQARGKKEALEAQQSLGRTVGPAGPF 149

  Fly   272 AAGLLPQHLMAPHYKLPNFHTLLSQY----------------MGLSNLNGIFGAGAAAAAAAASA 320
            ....||..|:    ....:...||..                ||||.| ..:|..:...|:.|:.
  Rat   150 FPSCLPGTLL----NTATYAQALSHVASLKGGPLCSCCVPDPMGLSFL-PTYGCQSNRTASVAAL 209

  Fly   321 GYPQNLSLHAGLSAMSQVSPPCSNSSPRESPKLVP------HPTP 359
            .........|.|.:.:.:  |.::|||..:.|.||      .|:|
  Rat   210 RMKAREHSEAVLQSANLL--PSTSSSPGPASKQVPPEGSQDKPSP 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 40/55 (73%)
DrgxNP_665710.2 Homeodomain 34..90 CDD:459649 40/55 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..135 13/49 (27%)
OAR 201..218 CDD:461067 2/16 (13%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 204..217 2/12 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..263 11/36 (31%)

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