DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Rhox11

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_941000.1 Gene:Rhox11 / 194738 MGIID:2681831 Length:206 Species:Mus musculus


Alignment Length:140 Identity:36/140 - (25%)
Similarity:61/140 - (43%) Gaps:40/140 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 QQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMER--------------------- 149
            ::::..:.:.:.:.|:..||.    .||::.....||..|..|.                     
Mouse    19 EEEITTEPEEKVAYTSNSGGF----ADEVTGIPKEGHQSSIGEHSCVMPNTQDTGREEPEETSKV 79

  Fly   150 -----------PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQN 203
                       |||..|    ||..||.:|:..|.:.||||...|::||..|::.|.:::.||.|
Mouse    80 AETSEQSLFRIPRKAYR----FTPGQLWELQAVFVENQYPDALKRKELAGLLNVDEQKIKDWFNN 140

  Fly   204 RRAKWRKREK 213
            :|||:||.::
Mouse   141 KRAKYRKIQR 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 21/52 (40%)
Rhox11NP_941000.1 Homeobox 96..146 CDD:278475 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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