DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and unc-42

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001263845.1 Gene:unc-42 / 192081 WormBaseID:WBGene00006778 Length:279 Species:Caenorhabditis elegans


Alignment Length:263 Identity:77/263 - (29%)
Similarity:105/263 - (39%) Gaps:82/263 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 NGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQ-----------------AKREDSPTNTDGGLD 127
            ||:|..|..           ||.|::.:.|.|.                 :.|..|..::||...
 Worm     7 NGANGASTV-----------SQFQEKVKDLGVSLHDFTAYYPSSLDTVSASLRPISDPSSDGAFK 60

  Fly   128 VDNDDELSSSL---------NNGHDLSDMERPRKV-----RRSRTTFTTFQLHQLERAFEKTQYP 178
            ....:.|..|:         |....|..:|||...     ||.|||||..||.:|:.||:|:.||
 Worm    61 KIKTEGLGGSVFGSSIAGVTNTPARLCSLERPESERLNSRRRHRTTFTQEQLQELDAAFQKSHYP 125

  Fly   179 DVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQ---------DKAGYLLPEQGLPEFPL 234
            |::.||:||....|:|||:||||||||||.||.||.:|:         ......|..||:  :|.
 Worm   126 DIYVREELARITKLNEARIQVWFQNRRAKHRKHEKQLNKAINPPHSFLSNPANTLMRQGM--YPA 188

  Fly   235 GI------------PLP-PHGLPGHPGSM----------------QSEFWPPHFALHQHFNPAAA 270
            .:            |:| |...|.:..|.                ..||:....||.....|:||
 Worm   189 ALNRDGFWYQSYQRPMPYPTASPSYSNSFTNPIANFGHSITSFQADDEFYQKSLALRMTTTPSAA 253

  Fly   271 AAA 273
            .||
 Worm   254 TAA 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 32/52 (62%)
unc-42NP_001263845.1 Homeobox 103..157 CDD:365835 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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