DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Rhox6

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_032981.1 Gene:Rhox6 / 19202 MGIID:1202888 Length:227 Species:Mus musculus


Alignment Length:176 Identity:48/176 - (27%)
Similarity:82/176 - (46%) Gaps:37/176 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QQQQQH------SQQQHHSQQQQQQQQLQVQAKR--------EDSPTNTDGGLDVDN---DDELS 135
            :|.|:.      :|:....:::.:.::.:::.:.        ||.....:||.::|.   ..|.:
Mouse    70 EQAQEEPAPLSPAQEATGGEEEGENKEGEMEGRHAGDGASSSEDDSILEEGGENIDQQPPQQEAA 134

  Fly   136 S--SLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 198
            |  |:.|.|.|:   |..::|..||.||..|||.|||.|::|:||.:..|.|||..:.:.|..||
Mouse   135 SPDSIRNPHVLN---RLAQLRYRRTRFTHSQLHDLERLFQETRYPSLRARRDLARWMGVDECDVQ 196

  Fly   199 VWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLP 244
            .||:.|||.:::..:.:.            ..|.|   |||....|
Mouse   197 NWFRMRRALFQRNRRVLM------------FCELP---PLPQSDSP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 26/52 (50%)
Rhox6NP_032981.1 Homeobox 154..204 CDD:278475 24/49 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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