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Protein Alignment hbn and npax-4
DIOPT Version :10
| Sequence 1: | NP_788420.1 |
Gene: | hbn / 47894 |
FlyBaseID: | FBgn0008636 |
Length: | 409 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001255346.1 |
Gene: | npax-4 / 182466 |
WormBaseID: | WBGene00007496 |
Length: | 202 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 63 |
Identity: | 19/63 - (30%) |
| Similarity: | 25/63 - (39%) |
Gaps: | 21/63 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 280 LMAPHYKLP-NF----HTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMSQ 337
:|:|....| || ..|||.: ||..|.|.|:|...|| |.|..:|:
Worm 1 MMSPSIFPPINFLFQNSALLSSF---------------AAQKALSNGHPSGSSL-AALEKLSK 47
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| hbn | NP_788420.1 |
Homeodomain |
154..210 |
CDD:459649 |
|
| npax-4 | NP_001255346.1 |
HTH_ARSR |
79..>142 |
CDD:481197 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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