DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and alr-1

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_509860.1 Gene:alr-1 / 181302 WormBaseID:WBGene00044330 Length:362 Species:Caenorhabditis elegans


Alignment Length:395 Identity:104/395 - (26%)
Similarity:132/395 - (33%) Gaps:150/395 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LHSSNSNGSNHLSHQQQQQHSQQQHHSQQQQ---------------QQQQLQVQAKREDSPTNTD 123
            ||..|....|..|....:|...|...:...|               .|.:|     :||....|.
 Worm    23 LHRPNGADLNQYSKSLMEQLQAQLFANPALQFPSFPPAFSIAALTNNQHEL-----KEDDGKKTP 82

  Fly   124 GGLDVDNDDELSSSLNN--------GHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDV 180
            .|   ||..|.:|.|:|        |.:..|....||.||.||||:.|||.:||:.|.:|.||||
 Worm    83 TG---DNILEAASVLDNRENGSPSDGTNSPDDNGKRKQRRYRTTFSAFQLDELEKVFARTHYPDV 144

  Fly   181 FTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPG 245
            ||||:||.|:.|:||||||||||||||:||:|:.....      |.|.           |..:|.
 Worm   145 FTREELATRVQLTEARVQVWFQNRRAKYRKQERSSTHH------PYQA-----------PMSIPN 192

  Fly   246 HPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAG 310
            ..|.                ||                      :..:|||       ..||   
 Worm   193 SNGD----------------NP----------------------YQMMLSQ-------EAIF--- 209

  Fly   311 AAAAAAAASAGYPQNLSLHAGLSAMSQVSP--PCSNSSPRESPKLVPHPTPPHATPPAGGNGGGG 373
              ||....:|.:..|..:....|.....||  |.:.|||         ..|...||.........
 Worm   210 --AAINQQAAAHLLNEQVRIATSDRRSQSPSVPVTTSSP---------ILPTSVTPTFQNADALN 263

  Fly   374 LLTGGL-----------------------------------------ISTAAQSPNSAAGASSNA 397
            :|.||:                                         :.|.....||.||:||..
 Worm   264 MLFGGITPVTQQLLYVQQFSRAMDAFRTQLLGSVPAGATAEVTDVVALKTEDSKSNSRAGSSSPT 328

  Fly   398 STPVS 402
            .|..|
 Worm   329 PTESS 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 37/52 (71%)
alr-1NP_509860.1 Homeobox 121..174 CDD:365835 37/52 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3639
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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