DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and LOC1281689

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_321639.6 Gene:LOC1281689 / 1281689 VectorBaseID:AGAMI1_013275 Length:436 Species:Anopheles gambiae


Alignment Length:400 Identity:116/400 - (28%)
Similarity:160/400 - (40%) Gaps:103/400 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TSQHHQ--------HHPIMPPAMRPAPVQESPVSRPRA------------VYSIDQILGNQHQIK 50
            |.|:|.        ::.:.||...|.|....|:....|            ..::...:.:....:
Mosquito    38 TEQYHDNKATGSVWYNVVPPPTGCPVPNDALPLGGSAASDGGTSGVIEPSCSNVSPSISSDPSGR 102

  Fly    51 RSDTPSEVLIT--HPHHGHPHHIH------HLHSSNSN--------------GSN------HLSH 87
            ..|...|:.||  ||||.|.||.|      |.|..::|              |||      .|:.
Mosquito   103 YYDEAGELSITTGHPHHHHHHHTHTHQHHTHHHQFSNNRLLMGEHRSPLIYEGSNVELGFGGLNI 167

  Fly    88 QQQQQHS--------------QQQHHSQQQQQ-----QQQLQVQAKREDS-----PTNTDGGLDV 128
            :.:...|              ::.||...:.:     ..||...:...||     |..:... .|
Mosquito   168 EGESGTSGLTNPGAAAATSVDKKVHHGGVKDRFLMSNLLQLNSTSSTADSSRTMMPPGSPSS-PV 231

  Fly   129 DNDDELSSSLNNGHDLSDMERP---RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRL 190
            |.|| |..:..:..|||...:.   :|.||:||||||.||..||:.||||.|||.|.||:||.::
Mosquito   232 DKDD-LEDTPTHKSDLSMRTKSCTLKKPRRNRTTFTTNQLTALEKIFEKTHYPDAFVREELANKV 295

  Fly   191 DLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPH----GLPGHPG--- 248
            .||||||||||||||||:|:.|: ..|...|.....:|...|..| .:||.    ||.|..|   
Mosquito   296 GLSEARVQVWFQNRRAKFRRNER-SAQSSGGGGSASKGEDFFHPG-AIPPSATSGGLAGFAGVVD 358

  Fly   249 ------------SMQSEFWPPHFAL---HQHFNPAAAA--AAGLLPQHLMAPHYKLPNFHTLLSQ 296
                        ::.|.|.|....|   |.|.:|||.:  |.|.........|.:..||.:...|
Mosquito   359 KPDSGPYSLSFSTLSSIFSPVVSQLQHHHAHHHPAAGSVRAGGQFYTAYKPQHDEAANFCSQSYQ 423

  Fly   297 YMGLSNLNGI 306
            :..|..||.:
Mosquito   424 FPSLKYLNNL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 40/55 (73%)
LOC1281689XP_321639.6 None

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