DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and LOC1270784

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_061513315.1 Gene:LOC1270784 / 1270784 VectorBaseID:AGAMI1_012254 Length:740 Species:Anopheles gambiae


Alignment Length:497 Identity:119/497 - (23%)
Similarity:178/497 - (35%) Gaps:155/497 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HPIMPPAMRPAPVQESPVSRP------RAVYSIDQILG--------NQHQIKRSDTPSEVLIT-- 61
            |...|.|...|....:.:.||      |:.::|.::||        ....:..:.|||....|  
Mosquito    16 HVTAPAAAAAAAAAAAALHRPVQTMPQRSPFAIQELLGLGSSGESTRPSGVVSAVTPSLYPTTVG 80

  Fly    62 --------------HPH-------------HGH--------PHHIHHLHSSNSNGSNHLSHQQQQ 91
                          .||             :.|        ||:|    :|.:.|...|      
Mosquito    81 QASFAAAAAAAGCADPHQMQMAAASRMAYFNAHAAVAAAFLPHNI----ASAAAGGGSL------ 135

  Fly    92 QHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRS 156
                |.|.:|.......|:.............||:|...|..:     :|.:....::.:|.|.|
Mosquito   136 ----QLHSAQSANNFTHLKSTFGGGGGACLPGGGVDSSKDFTI-----DGLNSYGKKKKKKRRHS 191

  Fly   157 RTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAG 221
            ||.||::||.:||:||::..||||:.||.|:::.||.|.|:|||||||||||||.||...:..  
Mosquito   192 RTIFTSYQLDELEKAFKEAHYPDVYAREMLSLKTDLPEDRIQVWFQNRRAKWRKTEKCWGRST-- 254

  Fly   222 YLLPEQGLPEFPL--GIPLPPHGLPGHPGSMQSEFWPPH-FALHQHFNPAAAAAAGLLPQHLMAP 283
             ::.|.||....:  .:|||...|   ..:.::|...|. ..:|:....:|||||        |.
Mosquito   255 -IMAEYGLYGAMVRHSLPLPETIL---KSAKENETVAPWLLGMHRPSGDSAAAAA--------AT 307

  Fly   284 HYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGYPQ----------NLSLHAGLSAMSQV 338
            ....|               ||..|.|...........|.:          |||:....:.|.:.
Mosquito   308 DEPEP---------------NGGGGGGGGGVGGQRLLDYYRNYTRDPTTDINLSVSVSSAGMHKK 357

  Fly   339 SPPCS-------NSSPRESPKL-------------------VPHPTPPHATPPAG---------- 367
            |...:       ::|.||..:.                   .|..:||.|:..:|          
Mosquito   358 SLEAAETLKNSEDNSDREETRTESSETSGGSAAALHCTLGSSPLKSPPLASDGSGCGRGDCGADG 422

  Fly   368 -------GNGGGGLLTGGLISTAAQSPNSAAGASSNASTPVS 402
                   |.||||.:.|.......:..:||..|.|:|...||
Mosquito   423 AGGRDGTGGGGGGGMGGNGAPLNGKHGSSAGAARSSAMAKVS 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 34/55 (62%)
LOC1270784XP_061513315.1 None

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