DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Arx

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001292869.1 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus


Alignment Length:493 Identity:134/493 - (27%)
Similarity:190/493 - (38%) Gaps:152/493 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TTTTSQHHQHHPIMPPAMRPAPVQES--PVSRPRAVYSIDQI---LGNQHQIKRSDT-------- 54
            |.|.....:..|..|||.||...|:|  .|:...|..:.|.:   ...|..|.||.:        
Mouse   117 TGTAGPRGEVPPPPPPAARPGERQDSAGAVAAAAAAAAWDTLKISQAPQVSISRSKSYRENGAPF 181

  Fly    55 --PSEVL--------ITHPHHGHPHHIHHLHSSNSNGS--------------NHLSHQQQQQHSQ 95
              |...|        :.||.       ..|.:::..||              ..|...::.:..:
Mouse   182 VPPPPALDELSGPGGVAHPE-------ERLSAASGPGSAPAAGGGTGAEDDEEELLEDEEDEEEE 239

  Fly    96 QQHHSQQQQQQQQLQVQAKRED--------------------SPTNTDGG------------LDV 128
            ::......::..:...:|..::                    :...|:||            .|.
Mouse   240 EELLEDDDEELLEDDARALLKEPRRCSVATTGTVAAAAAAAAAAVATEGGELSPKEELLLHPEDA 304

  Fly   129 D-NDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 192
            : .|.|.|..|:.|.|..:....||.||.|||||::||.:|||||:||.||||||||:|||||||
Mouse   305 EGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 369

  Fly   193 SEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPGS--MQSEFW 255
            :||||||||||||||||||||             .|....|.|:|.|......||.|  :.:..:
Mouse   370 TEARVQVWFQNRRAKWRKREK-------------AGAQTHPPGLPFPGPLSATHPLSPYLDASPF 421

  Fly   256 PPHF-ALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAAS 319
            |||. ||...:..||||||...|.....|                             .:|:...
Mouse   422 PPHHPALDSAWTAAAAAAAAAFPSLPPPP-----------------------------GSASLPP 457

  Fly   320 AGYPQNLSLHAGLSAMSQ---VSP----------PCSNSSPRESPKLVPHPTPPHATPPAGGNGG 371
            :|.|..||...|.:....   :||          |.:::|  .:..|:..|||            
Mouse   458 SGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSAS--TAAALLRQPTP------------ 508

  Fly   372 GGLLTGGLISTAAQSPNSAAGASSNASTPVSVVTKGED 409
              .:.|.:.|.|...|.:|| |...||:..::..|.::
Mouse   509 --AVEGAVASGALADPATAA-ADRRASSIAALRLKAKE 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 43/52 (83%)
ArxNP_001292869.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264 26/153 (17%)
Homeobox 334..386 CDD:278475 43/51 (84%)
OAR 528..545 CDD:281777 3/16 (19%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545 2/12 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3639
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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