DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Alx3

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_031467.1 Gene:Alx3 / 11694 MGIID:1277097 Length:343 Species:Mus musculus


Alignment Length:397 Identity:115/397 - (28%)
Similarity:160/397 - (40%) Gaps:118/397 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QHHPIMPPAMRPAPVQESPVSR----------------PRAVYSIDQILGNQHQIKRSDTPSEVL 59
            |..|...|.:.|||.:...:||                |.|.|..|  ||          |..||
Mouse    29 QGTPDAAPHLHPAPPRGPRLSRFPACGPLEPYLPEPAKPPAKYLQD--LG----------PGPVL 81

  Fly    60 ITHPHHGHPHHIHHLHSSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAK--REDSPTNT 122
                :.||.:          .||           ::.:..:.:.....||.|..:  ..|.|:|.
Mouse    82 ----NGGHFY----------EGS-----------AEAEEKASKAASFPQLPVDCRGGPRDGPSNV 121

  Fly   123 D-------GGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDV 180
            .       ..|.|    .||..|.:..:|:  :...|.||:||||:||||.:||:.|:||.||||
Mouse   122 QASPGPCLASLSV----PLSPGLPDSMELA--KTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDV 180

  Fly   181 FTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLP- 244
            :.||.||:|.||:|||||||||||||||||||::...        ::|...|.....:..  || 
Mouse   181 YAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKM--------QEGRNPFTTAYDISV--LPR 235

  Fly   245 --GHPGSMQSEFWPPHFALHQHFNPAAAAAAG---LLPQHLMAPHYKLPNFHTLLSQYM-GLSNL 303
              .|| .:|:..||         :|.:.:..|   :.|:.:.:|         .:|.|. ...|:
Mouse   236 TDSHP-QLQNSLWP---------SPGSGSPGGPCLMSPEGIPSP---------CMSPYSHSHGNV 281

  Fly   304 NGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMSQVSPPCSNSSPRESPKLVPHPTPPHATPPAGG 368
            .|..|..|:.||      :|...|:|....|:...|...|.....:||.||.....|...|    
Mouse   282 AGFMGVPASPAA------HPGIYSIHGFPPALGGHSFEPSPDGDYKSPSLVSLRMKPKEPP---- 336

  Fly   369 NGGGGLL 375
                |||
Mouse   337 ----GLL 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 38/52 (73%)
Alx3NP_031467.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..122 27/129 (21%)
SP2 32..>141 CDD:281067 30/149 (20%)
Homeobox 157..209 CDD:278475 38/51 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..343 11/39 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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