DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment hbn and rax2

DIOPT Version :9

Sequence 1:	NP_788420.1	Gene:	hbn / 47894	FlyBaseID:	FBgn0008636	Length:	409	Species:	Drosophila melanogaster
Sequence 2:	XP_002941436.1	Gene:	rax2 / 100494721	XenbaseID:	XB-GENE-494483	Length:	227	Species:	Xenopus tropicalis

Alignment Length:	204	Identity:	73/204 - (35%)
Similarity:	99/204 - (48%)	Gaps:	43/204 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   115 REDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPD 179
            |||..|.|.|..: ..|:||..              :|.||:||||||:|||:||||||::.|||
Frog    13 REDGSTPTPGTPE-GEDNELPK--------------KKHRRNRTTFTTYQLHELERAFERSHYPD 62

  Fly   180 VFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPLG--------- 235
            |::||:|||::.|.|.||||||||||||||::||........:..|.......|:.
Frog    63 VYSREELAMKVSLPEVRVQVWFQNRRAKWRRQEKLETSSSKLHDSPLLSFSRSPMATGVGPLSNT 127

  Fly   236 IPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGL 300
            :||.|......||:..           .|..||..|     |...:.|.|:   .||.|:....:
Frog   128 LPLEPWLTSPIPGTTT-----------VHSMPAFMA-----PSQALQPTYQ---SHTFLNSGPPM 173

  Fly   301 SNLNGIFGA 309
            :.:..:.||
Frog   174 TPIQPLSGA 182

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeobox	156..209	CDD:278475	38/52 (73%)
rax2	XP_002941436.1	Homeobox	40..93	CDD:365835	39/52 (75%)
rax2	XP_002941436.1	OAR	200..216	CDD:367680
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D454642at33208
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920