Protein Alignment hbn and vsx2

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: XP_004917101.1
• Gene: vsx2 / 100493176
• XenbaseID: XB-GENE-853775
• Length: 377
• Species: Xenopus tropicalis
• Alignment Length: 377
• Identity: 102/377 - (27%)
• Similarity: 143/377 - (37%)
• Gaps: 109/377 - (28%)

  Fly    22 PAPVQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVLITHPHHGHPHHIH------HLHSSNSN 80
            ||||:.:.       :.|.:|||..   |...|||:           .|:|      ||.::.|
 Frog     8 PAPVRSTG-------FGIQEILGLN---KEPPTPSQ-----------RHLHPLSPGTHLLAARS- 50

  Fly    81 GSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDD-ELSSSLNNG--- 141
            |...|:.........|...........::|...:.|.|.|.:....||.:.| :|..||:..
 Frog    51 GLGLLAAGGIPTFYTQPGLLLGDPPGPRIQQTGQEEGSRTCSSDSEDVSSSDRKLPKSLSQSKKR 115

  Fly   142 --------HDLSDMERPR-----------KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLA 187
                    :.:.:..||:           .:|..||.||::||.:||:||.:..||||:.||.||
 Frog   116 KKRRHRYPNIMFEGNRPKIKFGVFTGNKGAIRSFRTIFTSYQLEELEKAFNEAHYPDVYAREMLA 180

  Fly   188 MRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPL--GIPLPPHGL-PGHPGS 249
            |:.:|.|.|:||||||||||||||||...:..   ::.|.||....:  .||||...| ....|.
 Frog   181 MKTELPEDRIQVWFQNRRAKWRKREKCWGRSS---VMAEYGLYGAMVRHSIPLPESILKSAKDGI 242

  Fly   250 MQSEFWPPHFALHQHFNPAAAAAAGL-LPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAA 313
            |:|            ..|......|| :|:....|.|:.                   |.||...
 Frog   243 MES------------CAPWLLVQDGLQMPRRFSKPEYQQ-------------------FFAGMHK 276

  Fly   314 AAAAASAGYPQNLSLHAGLSAMSQVSPPCSNSSPRESPKLVPHPTPPHATPP 365
            ....|:|               .:|..|     .||:|.|...||......|
 Frog   277 KTLEAAA---------------DRVQQP-----EREAPALPSQPTANERREP 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	34/55 (62%)
vsx2	XP_004917101.1	Homeodomain	147..203	CDD:459649	34/55 (62%)
		OAR	318..336	CDD:461067