Protein Alignment hbn and vsx1

DIOPT Version :10

• Sequence 1: NP_788420.1
• Gene: hbn / 47894
• FlyBaseID: FBgn0008636
• Length: 409
• Species: Drosophila melanogaster
• Sequence 2: NP_001093670.1
• Gene: vsx1 / 100101658
• XenbaseID: XB-GENE-853166
• Length: 344
• Species: Xenopus tropicalis
• Alignment Length: 154
• Identity: 62/154 - (40%)
• Similarity: 83/154 - (53%)
• Gaps: 22/154 - (14%)

  Fly   101 QQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQL 165
            |.:...|.|....|.:::.::.|..|...||.:.|||          :..||.||.||.||..||
 Frog   108 QPRADHQYLHASDKHKENISDDDSLLGDKNDLKASSS----------QAKRKKRRHRTVFTAHQL 162

  Fly   166 HQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLP 230
            .:||:||.:..||||:.||.||::.:|.|.|:||||||||||||||||...:..   ::.|.||.
 Frog   163 EELEKAFNEAHYPDVYAREMLALKTELPEDRIQVWFQNRRAKWRKREKCWGRSS---VMAEYGLY 224

  Fly   231 EFPL--GIPLP-------PHGLPG 245
            ...:  .||||       .:||.|
 Frog   225 GAMVRHSIPLPESIINSAKNGLVG 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hbn	NP_788420.1	Homeodomain	154..210	CDD:459649	34/55 (62%)
vsx1	NP_001093670.1	Homeodomain	151..207	CDD:459649	34/55 (62%)