DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and Rhox2e

DIOPT Version :10

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001078817.1 Gene:Rhox2e / 100040016 MGIID:3770272 Length:191 Species:Mus musculus


Alignment Length:120 Identity:29/120 - (24%)
Similarity:46/120 - (38%) Gaps:35/120 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LDVDNDDELSSSLNNGHD--------------LSDMERPRKVRRSRTT----------------- 159
            :|..|.::|.::   |.|              :.|:|..::|....:|                 
Mouse    74 MDNSNQEDLGAT---GCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPEFRHGWQQ 135

  Fly   160 -FTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREK 213
             |...||.:||..|:...|........||..:.:|||.||.||..||.|:|..::
Mouse   136 SFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKR 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 20/73 (27%)
Rhox2eNP_001078817.1 homeodomain 134..186 CDD:238039 19/51 (37%)

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