DRSC/TRiP Functional Genomics Resources

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Protein Alignment hbn and prop1

DIOPT Version :9

Sequence 1:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001170932.2 Gene:prop1 / 100001377 ZFINID:ZDB-GENE-081107-40 Length:227 Species:Danio rerio


Alignment Length:183 Identity:62/183 - (33%)
Similarity:85/183 - (46%) Gaps:48/183 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 DNDDELSSSLNNGHDLSDMERPRKV----------------------RRSRTTFTTFQLHQLERA 171
            :|..|:  ::::..|:.....||||                      ||.||||:..||..||.|
Zfish    12 ENYSEV--TVSSSADIDVQIHPRKVSQKSESVRDGGARARPYPSPSRRRHRTTFSNEQLEHLELA 74

  Fly   172 FEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQG-------- 228
            |.:..|||::.||:||....|:|||:||||||||||.||:::...:..|..::|.:|        
Zfish    75 FRQNHYPDIYYREELARVTKLNEARIQVWFQNRRAKQRKQDRITQKSLAVSMMPVRGPLFSTMCV 139

  Fly   229 --------------LPEFPLGIP-LPPHGLPGHPGSMQSEFWPPHFALHQHFN 266
                          ||..|...| |||.|.|.||.| .|:|..|..:|....|
Zfish   140 SSSAMGRQCQCPHSLPHVPQFSPVLPPGGYPPHPSS-GSQFSSPSGSLPSQAN 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbnNP_788420.1 Homeobox 156..209 CDD:278475 31/52 (60%)
prop1NP_001170932.2 Homeobox 59..112 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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