DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tws and B ALPHA

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001322511.1 Gene:B ALPHA / 841594 AraportID:AT1G51690 Length:610 Species:Arabidopsis thaliana


Alignment Length:517 Identity:243/517 - (47%)
Similarity:322/517 - (62%) Gaps:77/517 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GAKKPASNGEAS----WCFSQIKG--ALDDDVTDA------DIISCVEFNHDGELLATGDKGGRV 105
            |.:..|::.:.|    |.|||:.|  :..::|.:|      ||||.:||::.|..|||||:||||
plant    95 GDEVVAASADPSLPLEWRFSQVFGERSAGEEVQEAGVSSAVDIISAIEFDNSGNHLATGDRGGRV 159

  Fly   106 VIFQRDPASKAANPRR-----------GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLQQKN 159
            |:|:|...:.::..||           .|:...:.||||:||||||||||||||||||||.|..|
plant   160 VLFERTDTNNSSGTRRELEEADYPLRHPEFRYKTEFQSHDPEFDYLKSLEIEEKINKIRWCQTAN 224

  Fly   160 PVHFLLSTNDKTVKLWKVSERD-KSFGGYNTKEE----NGLIRDPQN------------------ 201
            ...|||||||||:|.|||.::. |.....|:...    ||.:....|                  
plant   225 GALFLLSTNDKTIKFWKVQDKKIKKICDMNSDPSRTVGNGTVASSSNSNITNSCLVNGGVSEVNN 289

  Fly   202 ------------VTALRVPSVKQIPLLVEASP----RRTFANAHTYHINSISVNSDQETFLSADD 250
                        :::||:|.|....   |:||    ||.:|:||.|||||||.|||.|||:||||
plant   290 SLCNDFSLPAGGISSLRLPVVVTSH---ESSPVARCRRVYAHAHDYHINSISNNSDGETFISADD 351

  Fly   251 LRINLWHLEVVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALC 315
            ||||||:||:.|||:||||:||..||:|:||||:||||||.||:..||||||:|||.|:|.:|||
plant   352 LRINLWNLEISNQSFNIVDVKPAKMEDLSEVITSAEFHPTHCNMLAYSSSKGSIRLIDLRQSALC 416

  Fly   316 DRHSKQFEEPENPTNRSFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHE 380
            |.|||.|||||....:|||:|||:|:||:|.:..|||::||||:::|:||::|:..|:.|:.|||
plant   417 DSHSKLFEEPEQAGPKSFFTEIIASVSDIKFAKEGRYLLSRDYMTLKLWDINMDAGPVATFQVHE 481

  Fly   381 YLRAKLCSLYENDCIFDKFECCWNGKDSSIMTGSYNNFFRVFD--RNSKKDVTLEASRDII---- 439
            ||:.|||.|||||.||||||||.:|......||||:|.||||.  ..|.:..||||||:.:    
plant   482 YLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNLFRVFGVAPGSTETATLEASRNPMRRHV 546

  Fly   440 ----KPKTVLK--PRKVCTGGKRKKDEISVDCLDFNKKILHTAWHPEENIIAVAATNNLFIF 495
                :|...|.  .|.|..|.:....:.:.:.||:..|:||.||||.||.||.||.|:|:::
plant   547 PIPSRPSRALSSITRVVSRGSESPGVDGNTNALDYTTKLLHLAWHPNENSIACAAANSLYMY 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 240/499 (48%)
WD40 82..423 CDD:295369 203/390 (52%)
WD40 repeat 84..132 CDD:293791 21/58 (36%)
WD40 repeat 150..227 CDD:293791 34/115 (30%)
WD40 repeat 233..272 CDD:293791 30/38 (79%)
WD40 repeat 283..323 CDD:293791 27/39 (69%)
WD40 repeat 341..377 CDD:293791 16/35 (46%)
WD40 repeat 398..439 CDD:293791 22/42 (52%)
B ALPHANP_001322511.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5170
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81915
Inparanoid 1 1.050 455 1.000 Inparanoid score I379
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D810409at2759
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm2618
orthoMCL 1 0.900 - - OOG6_100728
Panther 1 1.100 - - O PTHR11871
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X368
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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