DRSC/TRiP Functional Genomics Resources

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Protein Alignment tws and Ppp2r2b

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_082668.1 Gene:Ppp2r2b / 72930 MGIID:1920180 Length:446 Species:Mus musculus


Alignment Length:420 Identity:335/420 - (79%)
Similarity:376/420 - (89%) Gaps:0/420 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRGEYNVYSTFQSHEPEFDYLKSL 143
            |:|||||.|||||.||||||||||||||||||:..||....||||||||||||||||||||||||
Mouse    25 TEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQVHRRGEYNVYSTFQSHEPEFDYLKSL 89

  Fly   144 EIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFGGYNTKEENGLIRDPQNVTALRVP 208
            ||||||||||||.|:|..:||||||||||||||||||||...|||.|:|.|.:|||..:|.||||
Mouse    90 EIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVP 154

  Fly   209 SVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADDLRINLWHLEVVNQSYNIVDIKPT 273
            .::.:.|:|||:|||.|||||||||||||||||.||::||||||||||:.|:.|||:|||||||.
Mouse   155 VLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPA 219

  Fly   274 NMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDRHSKQFEEPENPTNRSFFSEII 338
            ||||||||||||||||..||.||||||||||||||||::||||||:|.|||||:|:|||||||||
Mouse   220 NMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRASALCDRHTKFFEEPEDPSNRSFFSEII 284

  Fly   339 SSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHEYLRAKLCSLYENDCIFDKFECCW 403
            |||||||.|:||||:::||||::|||||:||.:|||||.||:|||:|||||||||||||||||.|
Mouse   285 SSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVW 349

  Fly   404 NGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVLKPRKVCTGGKRKKDEISVDCLDF 468
            ||.||.|||||||||||:||||:|:||||||||:..||:.:|||||||.||||:|||||||.|||
Mouse   350 NGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDF 414

  Fly   469 NKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            :||||||||||.||||||||||||:|||||
Mouse   415 SKKILHTAWHPSENIIAVAATNNLYIFQDK 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 330/415 (80%)
WD40 82..423 CDD:295369 270/340 (79%)
WD40 repeat 84..132 CDD:293791 38/47 (81%)
WD40 repeat 150..227 CDD:293791 50/76 (66%)
WD40 repeat 233..272 CDD:293791 30/38 (79%)
WD40 repeat 283..323 CDD:293791 32/39 (82%)
WD40 repeat 341..377 CDD:293791 25/35 (71%)
WD40 repeat 398..439 CDD:293791 33/40 (83%)
Ppp2r2bNP_082668.1 CDC55 25..441 CDD:227498 330/415 (80%)
WD40 repeat 30..78 CDD:293791 38/47 (81%)
WD40 repeat 96..173 CDD:293791 50/76 (66%)
WD40 repeat 179..215 CDD:293791 27/35 (77%)
WD40 repeat 229..280 CDD:293791 41/50 (82%)
WD40 repeat 287..323 CDD:293791 25/35 (71%)
WD40 repeat 344..379 CDD:293791 28/34 (82%)
WD40 repeat 418..441 CDD:293791 20/22 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849983
Domainoid 1 1.000 740 1.000 Domainoid score I96
eggNOG 1 0.900 - - E1_COG5170
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 739 1.000 Inparanoid score I591
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm42326
orthoMCL 1 0.900 - - OOG6_100728
Panther 1 1.100 - - O PTHR11871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2
SonicParanoid 1 1.000 - - X368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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