DRSC/TRiP Functional Genomics Resources

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Protein Alignment tws and ppp2r2bb

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_017208286.1 Gene:ppp2r2bb / 558810 ZFINID:ZDB-GENE-041010-39 Length:446 Species:Danio rerio


Alignment Length:443 Identity:334/443 - (75%)
Similarity:385/443 - (86%) Gaps:11/443 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KPASNGEASWCFSQIKGALDDDVTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPR 120
            :|.|:..:|.|.           |:|||||.||||..||||||||||||||:|||:..||....|
Zfish    13 RPPSSLLSSSCH-----------TEADIISTVEFNPTGELLATGDKGGRVVVFQREQESKNQPHR 66

  Fly   121 RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFG 185
            |||||||||||||||||||||||||||||||||||.|:|..:||||||||||||||:|||||...
Zfish    67 RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKISERDKRPE 131

  Fly   186 GYNTKEENGLIRDPQNVTALRVPSVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADD 250
            |||.|:|:|.||||..:||||||.::.:.|:|||:|||.|||||||||||||||||.||::|.||
Zfish   132 GYNLKDEDGRIRDPSTITALRVPVLRPMDLMVEATPRRIFANAHTYHINSISVNSDYETYMSTDD 196

  Fly   251 LRINLWHLEVVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALC 315
            ||||||:||:.|:|:|||||||.||||||||||||||||.:||.||||||||:|||||||::|||
Zfish   197 LRINLWNLEITNRSFNIVDIKPANMEELTEVITAAEFHPNQCNTFVYSSSKGSIRLCDMRTSALC 261

  Fly   316 DRHSKQFEEPENPTNRSFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHE 380
            |.|||.|||||:|:||||||||||||||||.|:||||:::||||::||||::||:||:|||.||:
Zfish   262 DNHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYLMTRDYLTVKVWDINMESKPLETYQVHD 326

  Fly   381 YLRAKLCSLYENDCIFDKFECCWNGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVL 445
            |||:|||||||||||||||||.|||.||.:||||||||||:||||:|:||||||||:..||:.:|
Zfish   327 YLRSKLCSLYENDCIFDKFECVWNGTDSVLMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAIL 391

  Fly   446 KPRKVCTGGKRKKDEISVDCLDFNKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            ||||||.||||:|||||||.|||:||||||||||.||||||||||||:|||||
Zfish   392 KPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPNENIIAVAATNNLYIFQDK 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 326/429 (76%)
WD40 82..423 CDD:295369 265/340 (78%)
WD40 repeat 84..132 CDD:293791 36/47 (77%)
WD40 repeat 150..227 CDD:293791 51/76 (67%)
WD40 repeat 233..272 CDD:293791 29/38 (76%)
WD40 repeat 283..323 CDD:293791 31/39 (79%)
WD40 repeat 341..377 CDD:293791 24/35 (69%)
WD40 repeat 398..439 CDD:293791 32/40 (80%)
ppp2r2bbXP_017208286.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595812
Domainoid 1 1.000 735 1.000 Domainoid score I104
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81915
Inparanoid 1 1.050 737 1.000 Inparanoid score I583
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm24358
orthoMCL 1 0.900 - - OOG6_100728
Panther 1 1.100 - - O PTHR11871
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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