DRSC/TRiP Functional Genomics Resources

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Protein Alignment tws and PPP2R2D

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_060931.2 Gene:PPP2R2D / 55844 HGNCID:23732 Length:453 Species:Homo sapiens


Alignment Length:446 Identity:349/446 - (78%)
Similarity:401/446 - (89%) Gaps:0/446 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GAKKPASNGEASWCFSQIKGALDDDVTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAA 117
            |...||...:..|||||:|||:|:||.:|||||.||||:.|:||||||||||||||||:..:|:.
Human     6 GGGCPAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGDLLATGDKGGRVVIFQREQENKSR 70

  Fly   118 NPRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDK 182
            ...|||||||||||||||||||||||||||||||||||.|:|..||||||||||:||||:|||||
Human    71 PHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKISERDK 135

  Fly   183 SFGGYNTKEENGLIRDPQNVTALRVPSVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLS 247
            ...|||.|:|:|.:|||..:||||||.:|.:.|:|||||||.|||||||||||||||||.||:||
Human   136 RAEGYNLKDEDGRLRDPFRITALRVPILKPMDLMVEASPRRIFANAHTYHINSISVNSDHETYLS 200

  Fly   248 ADDLRINLWHLEVVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSA 312
            ||||||||||||:.::|:|||||||.||||||||||||||||.:||||||||||||||||||||:
Human   201 ADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPHQCNVFVYSSSKGTIRLCDMRSS 265

  Fly   313 ALCDRHSKQFEEPENPTNRSFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYP 377
            ||||||||.|||||:|::|||||||||||||||.|:|||||::|||||:|||||:||::|:||:.
Human   266 ALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMESRPVETHQ 330

  Fly   378 VHEYLRAKLCSLYENDCIFDKFECCWNGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPK 442
            ||||||:|||||||||||||||||||||.||:|||||||||||:|||::::||||||||:..||:
Human   331 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTGSYNNFFRMFDRDTRRDVTLEASRESSKPR 395

  Fly   443 TVLKPRKVCTGGKRKKDEISVDCLDFNKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            ..||||||||||||:|||||||.||||||||||||||.:|:|||||||||:|||||
Human   396 ASLKPRKVCTGGKRRKDEISVDSLDFNKKILHTAWHPVDNVIAVAATNNLYIFQDK 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 341/429 (79%)
WD40 82..423 CDD:295369 273/340 (80%)
WD40 repeat 84..132 CDD:293791 34/47 (72%)
WD40 repeat 150..227 CDD:293791 52/76 (68%)
WD40 repeat 233..272 CDD:293791 31/38 (82%)
WD40 repeat 283..323 CDD:293791 35/39 (90%)
WD40 repeat 341..377 CDD:293791 26/35 (74%)
WD40 repeat 398..439 CDD:293791 32/40 (80%)
PPP2R2DNP_060931.2 CDC55 14..448 CDD:227498 341/433 (79%)
WD 1 32..71 27/38 (71%)
WD40 repeat 37..85 CDD:293791 34/47 (72%)
WD 2 97..138 33/40 (83%)
WD40 repeat 103..180 CDD:293791 52/76 (68%)
WD 3 181..219 31/37 (84%)
WD40 repeat 186..222 CDD:293791 28/35 (80%)
WD 4 230..270 36/39 (92%)
WD40 repeat 236..287 CDD:293791 43/50 (86%)
WD 5 289..327 29/37 (78%)
WD40 repeat 294..330 CDD:293791 26/35 (74%)
WD 6 344..385 33/40 (83%)
WD40 repeat 351..386 CDD:293791 27/34 (79%)
WD 7 420..452 28/32 (88%)
WD40 repeat 425..448 CDD:293791 18/22 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159609
Domainoid 1 1.000 740 1.000 Domainoid score I99
eggNOG 1 0.900 - - E1_COG5170
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81915
Inparanoid 1 1.050 740 1.000 Inparanoid score I594
Isobase 1 0.950 - 0 Normalized mean entropy S276
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm40258
orthoMCL 1 0.900 - - OOG6_100728
Panther 1 1.100 - - LDO PTHR11871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2
SonicParanoid 1 1.000 - - X368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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