DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tws and PPP2R2C

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_065149.2 Gene:PPP2R2C / 5522 HGNCID:9306 Length:447 Species:Homo sapiens


Alignment Length:421 Identity:321/421 - (76%)
Similarity:375/421 - (89%) Gaps:0/421 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 VTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRGEYNVYSTFQSHEPEFDYLKS 142
            ||:|||||.|||||.||||||||||||||||||:|.||.|...:|||:|||||||||||||||||
Human    21 VTEADIISTVEFNHTGELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKS 85

  Fly   143 LEIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFGGYNTKEENGLIRDPQNVTALRV 207
            ||||||||||:||.|:|..|.||||||||:||||::||||...|||.|:|.|.::|...||:|:|
Human    86 LEIEEKINKIKWLPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQV 150

  Fly   208 PSVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADDLRINLWHLEVVNQSYNIVDIKP 272
            |.:|.:.|:||.||||.|||.|||||||||||||.||::||||||||||||.:.::|:|||||||
Human   151 PVLKPMDLMVEVSPRRIFANGHTYHINSISVNSDCETYMSADDLRINLWHLAITDRSFNIVDIKP 215

  Fly   273 TNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDRHSKQFEEPENPTNRSFFSEI 337
            .|||:|||||||:||||..||:||||||||::||||||:|||||:|||.|||||:|:||||||||
Human   216 ANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDKHSKLFEEPEDPSNRSFFSEI 280

  Fly   338 ISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHEYLRAKLCSLYENDCIFDKFECC 402
            |||:||||.|:|||||::||||::|||||:||.:|||||.||:|||:|||||||||||||||||.
Human   281 ISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVHDYLRSKLCSLYENDCIFDKFECA 345

  Fly   403 WNGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVLKPRKVCTGGKRKKDEISVDCLD 467
            |||.||.||||:||||||:||||:|:||||||||:..||:.|||||:||.||||::|:||||.||
Human   346 WNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCVGGKRRRDDISVDSLD 410

  Fly   468 FNKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            |.||||||||||.|||||:||||||:|||||
Human   411 FTKKILHTAWHPAENIIAIAATNNLYIFQDK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 316/416 (76%)
WD40 82..423 CDD:295369 258/340 (76%)
WD40 repeat 84..132 CDD:293791 37/47 (79%)
WD40 repeat 150..227 CDD:293791 45/76 (59%)
WD40 repeat 233..272 CDD:293791 29/38 (76%)
WD40 repeat 283..323 CDD:293791 30/39 (77%)
WD40 repeat 341..377 CDD:293791 25/35 (71%)
WD40 repeat 398..439 CDD:293791 32/40 (80%)
PPP2R2CNP_065149.2 CDC55 21..438 CDD:227498 316/416 (76%)
WD 1 22..61 32/38 (84%)
WD40 repeat 27..75 CDD:293791 37/47 (79%)
WD 2 87..128 30/40 (75%)
WD40 repeat 93..171 CDD:293791 46/77 (60%)
WD 3 171..209 28/37 (76%)
WD40 repeat 176..212 CDD:293791 26/35 (74%)
WD 4 220..260 31/39 (79%)
WD40 repeat 226..277 CDD:293791 39/50 (78%)
WD 5 279..317 27/37 (73%)
WD40 repeat 284..320 CDD:293791 25/35 (71%)
WD 6 334..375 33/40 (83%)
WD40 repeat 341..376 CDD:293791 27/34 (79%)
WD 7 410..446 28/32 (88%)
WD40 repeat 415..438 CDD:293791 19/22 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159612
Domainoid 1 1.000 740 1.000 Domainoid score I99
eggNOG 1 0.900 - - E1_COG5170
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 740 1.000 Inparanoid score I594
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm40258
orthoMCL 1 0.900 - - OOG6_100728
Panther 1 1.100 - - O PTHR11871
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X368
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.770

Return to query results.
Submit another query.