DRSC/TRiP Functional Genomics Resources

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Protein Alignment tws and ppp2r2d

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001006697.1 Gene:ppp2r2d / 448324 XenbaseID:XB-GENE-940312 Length:447 Species:Xenopus tropicalis


Alignment Length:434 Identity:346/434 - (79%)
Similarity:395/434 - (91%) Gaps:0/434 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 WCFSQIKGALDDDVTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRGEYNVYST 129
            |||||:|||:|:||.:|||||.||||..|:||||||||||||||||:..:|:....|||||||||
 Frog    12 WCFSQVKGAIDEDVAEADIISTVEFNCSGDLLATGDKGGRVVIFQREQENKSRPHSRGEYNVYST 76

  Fly   130 FQSHEPEFDYLKSLEIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFGGYNTKEENG 194
            ||||||||||||||||||||||||||.|:|..||||||||||:||||:|||||...|||.|:::|
 Frog    77 FQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKISERDKRVEGYNLKDDDG 141

  Fly   195 LIRDPQNVTALRVPSVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADDLRINLWHLE 259
            .:|||..:|:||||.:|.:.|:|||||||.|||||||||||||||||.||:||||||||||||||
 Frog   142 RLRDPFRITSLRVPILKPMDLMVEASPRRIFANAHTYHINSISVNSDHETYLSADDLRINLWHLE 206

  Fly   260 VVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDRHSKQFEE 324
            :.::|:|||||||.||||||||||||||||..|||||||||||||||||||.:||||||||.|||
 Frog   207 ITDRSFNIVDIKPANMEELTEVITAAEFHPHHCNVFVYSSSKGTIRLCDMRDSALCDRHSKFFEE 271

  Fly   325 PENPTNRSFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHEYLRAKLCSL 389
            ||:|::|||||||||||||||.|||||||::|||||:|||||:||::|:|||.||||||:|||||
 Frog   272 PEDPSSRSFFSEIISSISDVKFSNSGRYMMTRDYLSVKVWDLNMESRPVETYQVHEYLRSKLCSL 336

  Fly   390 YENDCIFDKFECCWNGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVLKPRKVCTGG 454
            ||||||||||||||||.||:|||||||||||:||||:::|:||||||:..||:.:||||||||||
 Frog   337 YENDCIFDKFECCWNGSDSAIMTGSYNNFFRMFDRNTRRDITLEASRESSKPRAILKPRKVCTGG 401

  Fly   455 KRKKDEISVDCLDFNKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            |||||||:||.||||||||||||||.:|||||||||||:|||||
 Frog   402 KRKKDEINVDSLDFNKKILHTAWHPTDNIIAVAATNNLYIFQDK 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 341/429 (79%)
WD40 82..423 CDD:295369 272/340 (80%)
WD40 repeat 84..132 CDD:293791 34/47 (72%)
WD40 repeat 150..227 CDD:293791 50/76 (66%)
WD40 repeat 233..272 CDD:293791 31/38 (82%)
WD40 repeat 283..323 CDD:293791 34/39 (87%)
WD40 repeat 341..377 CDD:293791 27/35 (77%)
WD40 repeat 398..439 CDD:293791 32/40 (80%)
ppp2r2dNP_001006697.1 CDC55 7..442 CDD:227498 341/429 (79%)
WD 1 26..65 27/38 (71%)
WD40 repeat 31..79 CDD:293791 34/47 (72%)
WD 2 91..132 33/40 (83%)
WD40 repeat 97..174 CDD:293791 50/76 (66%)
WD 3 175..213 31/37 (84%)
WD40 repeat 180..216 CDD:293791 28/35 (80%)
WD 4 224..264 35/39 (90%)
WD40 repeat 230..281 CDD:293791 42/50 (84%)
WD 5 283..321 30/37 (81%)
WD40 repeat 288..324 CDD:293791 27/35 (77%)
WD 6 338..379 33/40 (83%)
WD40 repeat 345..380 CDD:293791 27/34 (79%)
WD 7 414..447 29/32 (91%)
WD40 repeat 419..442 CDD:293791 19/22 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 738 1.000 Domainoid score I107
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81915
Inparanoid 1 1.050 738 1.000 Inparanoid score I599
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm47431
Panther 1 1.100 - - LDO PTHR11871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2
SonicParanoid 1 1.000 - - X368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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