DRSC/TRiP Functional Genomics Resources

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Protein Alignment tws and ppp2r2d

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_998045.1 Gene:ppp2r2d / 405816 ZFINID:ZDB-GENE-040426-2086 Length:447 Species:Danio rerio


Alignment Length:434 Identity:348/434 - (80%)
Similarity:395/434 - (91%) Gaps:0/434 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 WCFSQIKGALDDDVTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRGEYNVYST 129
            |||||:|||:|:||.:|||||.||||:.||||||||||||||||||:..||.....|||||||||
Zfish    12 WCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQREQESKNRPLSRGEYNVYST 76

  Fly   130 FQSHEPEFDYLKSLEIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFGGYNTKEENG 194
            ||||||||||||||||||||||||||.|:|..||||||||||:||||:|||||...|||.|:|:|
Zfish    77 FQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKISERDKRAEGYNLKDEDG 141

  Fly   195 LIRDPQNVTALRVPSVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADDLRINLWHLE 259
            .:|||..:|:||||.:..:.|:|||||||.|||||||||||||||||.||:||||||||||||||
Zfish   142 RLRDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYHINSISVNSDYETYLSADDLRINLWHLE 206

  Fly   260 VVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDRHSKQFEE 324
            :.::|:|||||||.|||||||||||||.||.:|||||||||||||||||||:|||||||||.|||
Zfish   207 ITDRSFNIVDIKPANMEELTEVITAAECHPHQCNVFVYSSSKGTIRLCDMRAAALCDRHSKFFEE 271

  Fly   325 PENPTNRSFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHEYLRAKLCSL 389
            ||:|::|||||||||||||||.|:|||||::|||||:|||||:||.:|:|||.||||||:|||||
Zfish   272 PEDPSSRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSL 336

  Fly   390 YENDCIFDKFECCWNGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVLKPRKVCTGG 454
            ||||||||||||||||.||:|||||||||||:||||:::|:||||||:..||:.:||||||||||
Zfish   337 YENDCIFDKFECCWNGSDSAIMTGSYNNFFRMFDRNTRRDITLEASRESSKPRAMLKPRKVCTGG 401

  Fly   455 KRKKDEISVDCLDFNKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            ||||||||||.||||||||||||||:||:|||||||||:|||||
Zfish   402 KRKKDEISVDSLDFNKKILHTAWHPKENVIAVAATNNLYIFQDK 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 343/429 (80%)
WD40 82..423 CDD:295369 273/340 (80%)
WD40 repeat 84..132 CDD:293791 36/47 (77%)
WD40 repeat 150..227 CDD:293791 50/76 (66%)
WD40 repeat 233..272 CDD:293791 31/38 (82%)
WD40 repeat 283..323 CDD:293791 34/39 (87%)
WD40 repeat 341..377 CDD:293791 26/35 (74%)
WD40 repeat 398..439 CDD:293791 32/40 (80%)
ppp2r2dNP_998045.1 CDC55 7..442 CDD:227498 343/429 (80%)
WD 1 26..65 29/38 (76%)
WD40 29..370 CDD:295369 273/340 (80%)
WD40 repeat 31..79 CDD:293791 36/47 (77%)
WD 2 91..132 33/40 (83%)
WD40 repeat 97..174 CDD:293791 50/76 (66%)
WD 3 175..213 31/37 (84%)
WD40 repeat 180..216 CDD:293791 28/35 (80%)
WD 4 224..264 35/39 (90%)
WD40 repeat 230..281 CDD:293791 42/50 (84%)
WD 5 283..321 29/37 (78%)
WD40 repeat 288..324 CDD:293791 26/35 (74%)
WD 6 338..379 33/40 (83%)
WD40 repeat 345..380 CDD:293791 27/34 (79%)
WD 7 414..447 29/32 (91%)
WD40 repeat 419..442 CDD:293791 19/22 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595813
Domainoid 1 1.000 735 1.000 Domainoid score I104
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 737 1.000 Inparanoid score I583
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm24358
orthoMCL 1 0.900 - - OOG6_100728
Panther 1 1.100 - - LDO PTHR11871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2
SonicParanoid 1 1.000 - - X368
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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