DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tws and ppp2r2ab

DIOPT Version :10

Sequence 1:NP_476880.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001296367.1 Gene:ppp2r2ab / 327263 ZFINID:ZDB-GENE-030131-5474 Length:448 Species:Danio rerio


Alignment Length:437 Identity:339/437 - (77%)
Similarity:386/437 - (88%) Gaps:0/437 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 EASWCFSQIKGALDDDVTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRGEYNV 126
            :..|||||:|||:||||.:|||||.|||||.|||||||||||||||||::..:|:....|.||||
Zfish    10 DVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQETENKSQPQCRSEYNV 74

  Fly   127 YSTFQSHEPEFDYLKSLEIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFGGYNTKE 191
            |||||||||||||||||||||||||||||.|||...|||||||||:||||:|||||...|||.||
Zfish    75 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKE 139

  Fly   192 ENGLIRDPQNVTALRVPSVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADDLRINLW 256
            |:|..||...:|.||||..:.:.|:|||||||.|||||||||||||||||.||:|||||||||||
Zfish   140 EDGRYRDASTITTLRVPVFRPMDLMVEASPRRVFANAHTYHINSISVNSDNETYLSADDLRINLW 204

  Fly   257 HLEVVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDRHSKQ 321
            |||:.::|:|||||||.|||:||||||||||||.:||.||||||||||||||||::||||:|||.
Zfish   205 HLEITDRSFNIVDIKPANMEDLTEVITAAEFHPHQCNTFVYSSSKGTIRLCDMRASALCDKHSKL 269

  Fly   322 FEEPENPTNRSFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHEYLRAKL 386
            |||||:|:||||||||||||||||.|::||||::|||||:|:|||:||.:|:|||.||||||:||
Zfish   270 FEEPEDPSNRSFFSEIISSISDVKFSHNGRYMMTRDYLSVKIWDLNMENRPVETYQVHEYLRSKL 334

  Fly   387 CSLYENDCIFDKFECCWNGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVLKPRKVC 451
            |||||||||||||||||||.||.:||||||||||:.||..::||||||||:..||:.|||||:||
Zfish   335 CSLYENDCIFDKFECCWNGNDSVVMTGSYNNFFRMLDRTQRRDVTLEASRESCKPRQVLKPRRVC 399

  Fly   452 TGGKRKKDEISVDCLDFNKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            .||||||||||||.||||||||||||||:|||||||.||||:|||:|
Zfish   400 AGGKRKKDEISVDSLDFNKKILHTAWHPQENIIAVATTNNLYIFQEK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_476880.1 CDC55 65..495 CDD:227498 335/429 (78%)
WD40 repeat 84..132 CDD:293791 34/47 (72%)
WD40 repeat 150..227 CDD:293791 50/76 (66%)
WD40 repeat 233..272 CDD:293791 31/38 (82%)
WD40 repeat 283..323 CDD:293791 32/39 (82%)
WD40 repeat 341..377 CDD:293791 24/35 (69%)
WD40 repeat 398..439 CDD:293791 30/40 (75%)
ppp2r2abNP_001296367.1 CDC55 8..443 CDD:227498 335/432 (78%)
WD40 repeat 32..80 CDD:293791 34/47 (72%)
WD40 repeat 98..175 CDD:293791 50/76 (66%)
WD40 repeat 181..217 CDD:293791 28/35 (80%)
WD40 repeat 231..282 CDD:293791 41/50 (82%)
WD40 repeat 289..325 CDD:293791 24/35 (69%)
WD40 repeat 346..381 CDD:293791 25/34 (74%)
WD40 repeat 420..443 CDD:293791 19/22 (86%)

Return to query results.
Submit another query.