DRSC/TRiP Functional Genomics Resources

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Protein Alignment tws and Ppp2r2a

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_446451.1 Gene:Ppp2r2a / 117104 RGDID:620919 Length:447 Species:Rattus norvegicus


Alignment Length:437 Identity:349/437 - (79%)
Similarity:390/437 - (89%) Gaps:0/437 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 EASWCFSQIKGALDDDVTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRGEYNV 126
            :..|||||:|||:||||.:|||||.|||||.|||||||||||||||||::..:|..:..||||||
  Rat     9 DIQWCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNV 73

  Fly   127 YSTFQSHEPEFDYLKSLEIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFGGYNTKE 191
            |||||||||||||||||||||||||||||.|||...|||||||||:||||:|||||...|||.||
  Rat    74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKE 138

  Fly   192 ENGLIRDPQNVTALRVPSVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADDLRINLW 256
            |:|..|||..||.||||..:.:.|:|||||||.|||||||||||||:|||.||:|||||||||||
  Rat   139 EDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLW 203

  Fly   257 HLEVVNQSYNIVDIKPTNMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDRHSKQ 321
            |||:.::|:|||||||.||||||||||||||||..||.||||||||||||||||::||||||||.
  Rat   204 HLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKL 268

  Fly   322 FEEPENPTNRSFFSEIISSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHEYLRAKL 386
            |||||:|:||||||||||||||||.|:|||||::|||||:|||||:||.:|:|||.||||||:||
  Rat   269 FEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKL 333

  Fly   387 CSLYENDCIFDKFECCWNGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVLKPRKVC 451
            |||||||||||||||||||.||.:||||||||||:||||:|:|:||||||:..||:|||||||||
  Rat   334 CSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVC 398

  Fly   452 TGGKRKKDEISVDCLDFNKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            ..|||||||||||.||||||||||||||:|||||||.||||:|||||
  Rat   399 ASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDK 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 344/429 (80%)
WD40 82..423 CDD:295369 272/340 (80%)
WD40 repeat 84..132 CDD:293791 35/47 (74%)
WD40 repeat 150..227 CDD:293791 52/76 (68%)
WD40 repeat 233..272 CDD:293791 30/38 (79%)
WD40 repeat 283..323 CDD:293791 33/39 (85%)
WD40 repeat 341..377 CDD:293791 26/35 (74%)
WD40 repeat 398..439 CDD:293791 32/40 (80%)
Ppp2r2aNP_446451.1 CDC55 7..442 CDD:227498 344/432 (80%)
WD 1 26..65 28/38 (74%)
WD40 repeat 31..79 CDD:293791 35/47 (74%)
WD 2 91..132 33/40 (83%)
WD40 repeat 97..174 CDD:293791 52/76 (68%)
WD 3 175..213 30/37 (81%)
WD40 repeat 180..216 CDD:293791 27/35 (77%)
WD 4 224..264 34/39 (87%)
WD40 repeat 230..281 CDD:293791 42/50 (84%)
WD 5 283..321 29/37 (78%)
WD40 repeat 288..324 CDD:293791 26/35 (74%)
WD 6 338..379 33/40 (83%)
WD40 repeat 345..380 CDD:293791 27/34 (79%)
WD 7 414..446 29/32 (91%)
WD40 repeat 419..442 CDD:293791 19/22 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353662
Domainoid 1 1.000 738 1.000 Domainoid score I94
eggNOG 1 0.900 - - E1_COG5170
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 738 1.000 Inparanoid score I564
OMA 1 1.010 - - QHG54269
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 1 1.000 - - FOG0000622
OrthoInspector 1 1.000 - - otm44385
orthoMCL 1 0.900 - - OOG6_100728
Panther 1 1.100 - - O PTHR11871
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X368
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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