DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tws and ppp2r2ba

DIOPT Version :9

Sequence 1:NP_001287269.1 Gene:tws / 47877 FlyBaseID:FBgn0004889 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_009289579.1 Gene:ppp2r2ba / 100001644 ZFINID:ZDB-GENE-101026-5 Length:439 Species:Danio rerio


Alignment Length:420 Identity:322/420 - (76%)
Similarity:368/420 - (87%) Gaps:0/420 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRGEYNVYSTFQSHEPEFDYLKSL 143
            |:|||||.||||..||||||||||||||:|||:..||....||||||||||||||||||||||||
Zfish    18 TEADIISTVEFNPSGELLATGDKGGRVVVFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSL 82

  Fly   144 EIEEKINKIRWLQQKNPVHFLLSTNDKTVKLWKVSERDKSFGGYNTKEENGLIRDPQNVTALRVP 208
            ||||||||||||.|:|..:||||||||||||||:|||||...|||.|:|:|.:|||..:|.||||
Zfish    83 EIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKISERDKRPEGYNLKDEDGRVRDPATITTLRVP 147

  Fly   209 SVKQIPLLVEASPRRTFANAHTYHINSISVNSDQETFLSADDLRINLWHLEVVNQSYNIVDIKPT 273
            .::.:.|:||||.||.|.|||.|||||||:|||.:||:|.||||||||:|||.:.|:|:||:||.
Zfish   148 VLQPMDLMVEASARRVFCNAHAYHINSISINSDGQTFMSTDDLRINLWNLEVTDSSFNMVDMKPV 212

  Fly   274 NMEELTEVITAAEFHPTECNVFVYSSSKGTIRLCDMRSAALCDRHSKQFEEPENPTNRSFFSEII 338
            |||:||||||.|||||..||.|.||||||:|||||||.|||||:|||.|||||:|:|||||||||
Zfish   213 NMEDLTEVITNAEFHPQHCNTFAYSSSKGSIRLCDMRDAALCDKHSKFFEEPEDPSNRSFFSEII 277

  Fly   339 SSISDVKLSNSGRYMISRDYLSIKVWDLHMETKPIETYPVHEYLRAKLCSLYENDCIFDKFECCW 403
            |||||||.|:||||:::||||::|||||:||:||:|||.||:|||.|||||||||||||||||.|
Zfish   278 SSISDVKFSHSGRYLMTRDYLTVKVWDLNMESKPLETYQVHDYLRGKLCSLYENDCIFDKFECVW 342

  Fly   404 NGKDSSIMTGSYNNFFRVFDRNSKKDVTLEASRDIIKPKTVLKPRKVCTGGKRKKDEISVDCLDF 468
            ||.||.|||||||||||:||||:|:||||||||:..||:.|||||:||.||||:|||||||.|||
Zfish   343 NGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAVLKPRRVCVGGKRRKDEISVDSLDF 407

  Fly   469 NKKILHTAWHPEENIIAVAATNNLFIFQDK 498
            :||||||.|||.||||||||||||:|||||
Zfish   408 SKKILHTGWHPYENIIAVAATNNLYIFQDK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twsNP_001287269.1 CDC55 65..495 CDD:227498 317/415 (76%)
WD40 82..423 CDD:295369 258/340 (76%)
WD40 repeat 84..132 CDD:293791 36/47 (77%)
WD40 repeat 150..227 CDD:293791 49/76 (64%)
WD40 repeat 233..272 CDD:293791 26/38 (68%)
WD40 repeat 283..323 CDD:293791 30/39 (77%)
WD40 repeat 341..377 CDD:293791 25/35 (71%)
WD40 repeat 398..439 CDD:293791 33/40 (83%)
ppp2r2baXP_009289579.1 CDC55 9..434 CDD:227498 317/415 (76%)
WD40 11..362 CDD:295369 260/343 (76%)
WD40 repeat 23..71 CDD:293791 36/47 (77%)
WD40 repeat 89..166 CDD:293791 49/76 (64%)
WD40 repeat 172..207 CDD:293791 24/34 (71%)
WD40 repeat 222..273 CDD:293791 39/50 (78%)
WD40 repeat 280..316 CDD:293791 25/35 (71%)
WD40 repeat 337..372 CDD:293791 28/34 (82%)
WD40 repeat 411..434 CDD:293791 19/22 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595815
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5170
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266049at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.