DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and Dqx1

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_291084.1 Gene:Dqx1 / 93838 MGIID:2136388 Length:718 Species:Mus musculus


Alignment Length:550 Identity:90/550 - (16%)
Similarity:174/550 - (31%) Gaps:174/550 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQQFRNI-SHLVVNDVHLHD 275
            :.|.|:.....||..:|..:|.......:|.:.:...:.||:.:.|.:.... |.|::::.....
Mouse   109 ASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERS 173

  Fly   276 PYTDI---LLSEIRMALSSHQNL----RVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSY 333
            ..:|:   ||.:.|:     :||    |||:::......||..|:|....:.:.::|...|.::|
Mouse   174 VASDLLQGLLRDTRL-----RNLPGDPRVVVVTDPALEPKFQAFWGNSPIVRVPREPGGDPTLAY 233

  Fly   334 LNELHSCIALAGIHKGPDI--YKEIPEAFRANNPRNEQMDKCLQAY-GELGTDAALRPFLYAVNY 395
            .:.:.:.:..|......::  .:|.|.......|..|::..|.::. ||:||             
Mouse   234 KDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGT------------- 285

  Fly   396 DLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVL 460
                                           |...|..|.::.|                     
Mouse   286 -------------------------------LAVPGPPPRVLPL--------------------- 298

  Fly   461 NSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILS 525
                                                     .||                     
Mouse   299 -----------------------------------------HPG--------------------- 301

  Fly   526 HCLTGSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKVP-FKYQIDTACRLN 589
                     |:          ..:|.:...:|.:|:.::.|..:......:| .::.||:...|.
Mouse   302 ---------CA----------QAIQTVYEDTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELR 347

  Fly   590 NVYDTTSCSGDDRFEWVAK---DALLRRELILQPNKGDVQCFRLISKEAYE-ELSETSQPSLQTM 650
            :||:....:.......::|   :|.|.|.....|.    .|.||.||...| |......|.:...
Mouse   348 SVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPG----SCLRLYSKSTLELEAPPLPHPKVCEE 408

  Fly   651 QLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPV 715
            .|..:.|   ||....|........:..|....:..|::.|..:..|:|..:::.||..|.:.|:
Mouse   409 NLSSLVL---LLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGELSDLGVILSEFPL 470

  Fly   716 SCQLGRMLIFGILLRCLDPILTIVSSLSTA 745
            ..:|.:.|:......|:|.:||:.:.|:.|
Mouse   471 PPELAKALLASCEFNCVDEMLTLAAMLTAA 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 24/109 (22%)
ANKYR <398..>460 CDD:440430 4/61 (7%)
ANK repeat 406..438 CDD:293786 3/31 (10%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 13/129 (10%)
HA2 687..789 CDD:461295 15/58 (26%)
OB_NTP_bind 862..945 CDD:400182
Dqx1NP_291084.1 HrpA 41..>615 CDD:441249 89/549 (16%)
DEAD-like_helicase_N 42..221 CDD:475120 25/116 (22%)
DEAQ box. /evidence=ECO:0000305|PubMed:11353393 167..170 0/2 (0%)
OB_NTP_bind 591..674 CDD:400182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 690..718
Blue background indicates that the domain is not in the aligned region.

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