DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and ECM16

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_013847.1 Gene:ECM16 / 855158 SGDID:S000004735 Length:1267 Species:Saccharomyces cerevisiae


Alignment Length:1002 Identity:195/1002 - (19%)
Similarity:362/1002 - (36%) Gaps:300/1002 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 TLNMFTLLSRKSLMGKEDLELYADLVSMKANASDLPSLHLPLPAIRPPNLR--FWTEAQLNFLTA 147
            |||    :..|.::.||||:            ..|...::|   |...:.|  |:.|.       
Yeast   340 TLN----IDYKPIIRKEDLD------------DGLQEAYVP---INENSTRKAFYVEV------- 378

  Fly   148 FLGHSLSDE----------------ILQSLYASRVIVYNAALCWD----KSVFLPLVI------L 186
                |.|||                |:::::.:.|::    :|.:    |:..:|..:      .
Yeast   379 ----SRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVI----ICGETGSGKTTQVPQFLYEAGFGA 435

  Fly   187 DDCRNKKSNVKIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYF 251
            :|..:....|.|  .:.:.:.|...::|.||..|:. |..||.|:.:.|.....|.:.:.|....
Yeast   436 EDSPDYPGMVGI--TQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVL 497

  Fly   252 LRSLTSQ-QFRNISHLVVNDVHLHDPYTDILLS------EIRMALS-----SHQNLRVVLLSQMG 304
            ||.:... :....|.:::::.|..:..||||:.      .:|..|.     .|:.|:::::|...
Yeast   498 LREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL 562

  Fly   305 NPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSCIALAGIHKGPDIYKEIPEAFRAN-----N 364
            ....|::        |....| :||.|..::.                 ::.|.:...|     |
Yeast   563 RVSDFSE--------NKTLFP-IAPPVLQVDA-----------------RQFPVSIHFNRRTAFN 601

  Fly   365 PRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLTGKTAV-HFASELNKANHLRLLL 428
            ..:|...|..:.:.:|...|.|                 ..|||:..: |....|.|.     ..
Yeast   602 YTDEAFRKTCKIHQKLPPGAIL-----------------VFLTGQQEITHMVKRLRKE-----FP 644

  Fly   429 FMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTK 493
            |.....|..||  :..:|...:|.                  |:...:..|.|..:.::...:.|
Yeast   645 FKKNSKYNKDL--ETPVSKMGINS------------------KTTDLEAEDIDFSVQVIDQDKFK 689

  Fly   494 P--EYSPGEYSPGN------------------------ILIILPTYYHIVKLNYMILSHCLTGSL 532
            .  .|...|.:.||                        .|.:||.|                   
Yeast   690 SAIRYEEDEGNSGNGEDEEDEEEEGFEEVLTEGQTANDPLYVLPLY------------------- 735

  Fly   533 QECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKVP-FKYQIDTACRLNNVYDTTS 596
               |:....:.||     ........:...::||::.|: .|.:| .:|.:|:.......|:.: 
Yeast   736 ---SLLPTKEQMR-----VFQKPPQGSRLCIVATNVAET-SLTIPGVRYVVDSGRSKERKYNES- 790

  Fly   597 CSGDDRFE--WVAKDALLRRELILQPNKGDVQCFRLISKEAYE-ELSETSQPSLQTMQLDKICLA 658
             :|...||  ||:|.:..:|. ......|...|:||.|...:| :..:.|:|.:..|.::.|.|.
Yeast   791 -NGVQSFEVGWVSKASANQRS-GRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQ 853

  Fly   659 VKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGRML 723
            :|.::.:.||:....   :||..:.:..|:|.|:.:..||:.|.:|..|.::...|:|.:..:||
Yeast   854 MKSMAIHNIINFPFP---TPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKML 915

  Fly   724 IFGILLRCLDPILTIVSSLSTADP------LGI--------PFTEDIDNL---WDRFTIYIQNSI 771
            :......||..|:.|||:||..||      |||        | .|::|:.   .|..|..:...:
Yeast   916 LVSDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNP-DENLDDKIREHDESTPGMDPEL 979

  Fly   772 KKE---RTYLSDNQFS--DHFIFV-RLYK--EWQNRMHNRTPPLYLKDEYEFMLNGLMEQLTSIR 828
            |||   :.|.|.:|||  |.|..| ||..  ...:.:......:::|.  .|:...|||::..:|
Yeast   980 KKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEIFMKK--NFLRGKLMEEIVKLR 1042

  Fly   829 SEIVSSLRA-------ANLIHSR-------GKLSMNNLNQMSCNWHMVKAALTGGM--------- 870
            .:::..:::       |.:|.:.       ..:.:..|.||.|...:...|:...:         
Yeast  1043 KQLMYIIKSNTSKENIAVVIRNEDLKSDIPSVIQIKLLKQMICAGFVDHVAVRADVLFPDDAKIT 1107

  Fly   871 -------YPNIYAVDTRKSSLKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNRQKSHI 928
                   .|.|..:.||..:::..|   |.:||.::|.:..|                 ....::
Yeast  1108 NRTSIINIPYIPVLATRTPNIEDCF---VYIHPTSILNNLGE-----------------MPPKYM 1152

  Fly   929 VYATLVVPLAVAMFSGHPRIRLSPICD 955
            :|.:|       ...|:.:.|::.:||
Yeast  1153 LYYSL-------HLGGNNKTRMNTLCD 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 36/196 (18%)
ANKYR <398..>460 CDD:440430 12/62 (19%)
ANK repeat 406..438 CDD:293786 8/32 (25%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 23/155 (15%)
HA2 687..789 CDD:461295 40/123 (33%)
OB_NTP_bind 862..945 CDD:400182 13/98 (13%)
ECM16NP_013847.1 HrpA 390..>940 CDD:441249 126/658 (19%)
HA2 879..1006 CDD:461295 41/127 (32%)
OB_NTP_bind 1080..1184 CDD:400182 21/120 (18%)

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