DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and PRP16

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_013012.3 Gene:PRP16 / 853961 SGDID:S000001794 Length:1071 Species:Saccharomyces cerevisiae


Alignment Length:1040 Identity:188/1040 - (18%)
Similarity:352/1040 - (33%) Gaps:307/1040 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FRTSEHEAFANNARSLGLRSQVVHVNGNSCVKVYKQACRHYLEEPKTLVLSSGATLNMFTLLSRK 95
            ||..:.|..||..|            |:..|.:.:....|..:......:.:.|...:..|.:..
Yeast   267 FRNPDSEFSANAKR------------GSKLVALRRINMEHIQQSRDNTTVLNTAMGEVLGLENNN 319

  Fly    96 SLMGKEDLELYADLVSMKANASDLPSLHLPLPAIRPPNLRFWTEAQLNFLTAFLGHSLSDEILQS 160
            ....|.:.::..|......:..|:......||..|                      ...::|..
Yeast   320 KAKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFR----------------------CRSQLLSL 362

  Fly   161 LYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCIERQAILATYNSQRTANFFGEQLGE 225
            :..::|:|........|:..|...:.::.........|:..:.:.:.|...::|.|......||:
Yeast   363 IRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVAMEMQVPLGK 427

  Fly   226 TVGIQLPYFSAVSSS-TFIIYSTAQYFLR-SLTSQQFRNISHLVVNDVHLHDPYTDILLSEIRMA 288
            .||..:.:.....|. |.:.:.|....|| :|........|.:::::.|.....|||||...::.
Yeast   428 EVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKIL 492

  Fly   289 LSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSCIALAGIHKGPDIY 353
            |:..::|::::.|...|.|||:.|||.            ||:.:                     
Yeast   493 LARRRDLKLIITSATMNAKKFSAFFGN------------APQFT--------------------- 524

  Fly   354 KEIP------EAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLTGKTAV 412
              ||      :....:||        :|.|.|.....|::                        :
Yeast   525 --IPGRTFPVQTIYTSNP--------VQDYVEAAVSQAVK------------------------I 555

  Fly   413 HFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYVVKSAKPDF 477
            |.|::.:..:   :|:||.....|...|                 |.|....|..|..|....:|
Yeast   556 HLANDCSSGD---ILIFMTGQEDIETTF-----------------DTLQEKFLQVYSKKFGTANF 600

  Fly   478 VDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLTGSLQECSIFLLYD 542
            .:.                        |.:.|||.|            ..|...||    |.::.
Yeast   601 EEI------------------------NDIEILPIY------------SALPADLQ----FKIFQ 625

  Fly   543 NMRNDYLQALVNASDETVKVVLATDIIE-SLCLKVPFKYQIDTACRLNNVYDTTSCSGDDRFEWV 606
            ::..           ...|:::||:|.| ||.:| ..:|.||.......||:..          :
Yeast   626 DLHG-----------TKRKIIIATNIAETSLTIK-GIRYVIDCGYSKLKVYNPK----------I 668

  Fly   607 AKDALLRRELILQP-NKGDVQ-------------CFRLISKEAY-EELSETSQPSLQTMQLDKIC 656
            ..|:     |::.| :|.:..             .:||.:::.: |::...:.|.:|...|....
Yeast   669 GLDS-----LVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTL 728

  Fly   657 LAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGR 721
            |.:|.|.....:|::  ..|..|||.....::..|..|..:|.:..:|.||.::...|:...|.:
Yeast   729 LLLKSLDVTDELSKF--PFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSK 791

  Fly   722 MLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYIQNSIKKERTYLSDNQF--- 783
            :|:..:...|.|.:|||||.||      :|            .::.:...:::...::.|:|   
Yeast   792 ILLIAVRNGCSDEMLTIVSMLS------VP------------QVFYRPKERQKEADIARNKFFIA 838

  Fly   784 -SDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGLMEQLTSIRSEIVSSLRAANL-IHSRGK 846
             |||...:.::::|  |.:|.:.....|   .|:....:.:...||.::::.|::..: :.|.||
Yeast   839 KSDHLTLLNVFEQW--RANNFSSHWCNK---HFVQYKSLVRARDIRDQLLTILKSQKIPVISSGK 898

  Fly   847 LSMNNLNQMSCNWHMVKAALTGGMYPNIYAVDTRKSS-------LKSAFSGNVSMHPNTVLRDF- 903
                       :|.::|..:..|     :|....|.:       ||:..|  |.:||.:.|... 
Yeast   899 -----------DWDIIKKCICSG-----FAHQAAKITGLRNYVHLKTGVS--VQLHPTSALHGLG 945

  Fly   904 -LEPLNISAQSFRTPWIVCNRQKSHIVYATLVVPLAVAMFSGHPRIRLSPICDSEMSLTDRNVNV 967
             |.|..:..:...|       .|.:|...|.|.|..:..:.|       .:.|.:....|:    
Yeast   946 DLPPYVVYHELLMT-------SKEYICCVTSVDPFWLMEYGG-------LLYDIKRIKNDQ---- 992

  Fly   968 FIDEWIWMVMSKATAEMVMRTRYYFFKMYHDLLKHCSELDMWRRDC----EPVSQYTVLTDTLSK 1028
                       :||...:....|     .|.|.|...::|:..|.|    :.|.|...:||..:|
Yeast   993 -----------EATTTGLFGEHY-----EHTLDKVEDDIDINIRRCKDMRDSVIQELKMTDNSNK 1041

  Fly  1029  1028
            Yeast  1042  1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 6/31 (19%)
ANK 407..>460 CDD:238125 8/52 (15%)
Ank_2 413..>460 CDD:289560 8/46 (17%)
HrpA <484..973 CDD:224557 98/518 (19%)
HA2 694..763 CDD:214852 18/68 (26%)
OB_NTP_bind 823..945 CDD:285018 26/131 (20%)
PRP16NP_013012.3 HrpA 319..1071 CDD:224557 177/976 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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