DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and AT1G48650

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_001154411.1 Gene:AT1G48650 / 841287 AraportID:AT1G48650 Length:1206 Species:Arabidopsis thaliana


Alignment Length:968 Identity:217/968 - (22%)
Similarity:393/968 - (40%) Gaps:243/968 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GLRSQV-VHVNGNSCVKVYKQACRHYLEEPKTLV------LSSGATLN-----------MFTLLS 93
            ||:|:| .|::.             :|::.|||:      .||.:..|           |...|:
plant   213 GLQSEVDAHLHS-------------FLDQKKTLIPEMPRQNSSESLANGYGNYETPETVMQNSLA 264

  Fly    94 RKSLMGKEDLELYADLVSMKANASDLPSLHLPLPAIRPPNLRFWTEAQLNFLTAFLGHSLSDEIL 158
            |:.::....|:    |.|.:....|.|.                .:..:.|......:...|.:|
plant   265 RERILRPRSLQ----LKSKQQQWVDSPE----------------GQKMVGFRKTLPAYKEKDALL 309

  Fly   159 QSLYASRVIVYNAALCWDKSVFLPLVILDD----CRNKKSNVKIMCIERQAILATYNSQRTANFF 219
            :::.|::|:|.:......|:..||..||:.    .|.  :...|:|.:.:.|.|...|:|.|...
plant   310 KAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARG--ATCSIICTQPRRISAISVSERVAAER 372

  Fly   220 GEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRS-LTSQQFRNISHLVVNDVHLHDPYTDILLS 283
            |||:||:||.::.........|.:::.|....||. |..:..:.::|:||:::|......|.||.
plant   373 GEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLI 437

  Fly   284 EIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSCIALAGIHK 348
            .::..|....:|:::|:|...|.:.|:.:||.            ||.:                 
plant   438 VLKDLLPRRPDLKLILMSATLNAELFSSYFGG------------APAM----------------- 473

  Fly   349 GPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLTGKTAVH 413
                  .||                              .|.|.|.                 .|
plant   474 ------HIP------------------------------GFTYPVR-----------------AH 485

  Fly   414 FASELNKANHLRLLLFMGADPY-------------------IVDLFQQNAISLAAMNG-NHECID 458
            |..:..:.:..||..:...|.|                   ::....::|:..|...| |....|
plant   486 FLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEAADFKGYNFRTRD 550

  Fly   459 VLNSYSLHGYVVKSAKPDFVDYDLIIDIM-YLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYM 522
            .|:.:|          ||.:.::||.::: ::::       || .||.:|:.:..:..|..|...
plant   551 SLSCWS----------PDSIGFNLIENVLCHIVK-------GE-RPGAVLVFMTGWDDINSLKNQ 597

  Fly   523 ILSHCLTGSLQECSIFLLYDNMRNDYLQALVNASDETV-KVVLATDIIESLCLKVPFKYQIDTAC 586
            :.:|.|.|...:..:...:.:|.:...:.:.:...|.: |:||||::.|:........|.||...
plant   598 LEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGK 662

  Fly   587 RLNNVYD---TTSCSGDDRFEWVAKDALLRRELILQPNKGDV---QCFRLISKEAYEELSETSQP 645
            .....||   .|.|...   .|::|.|..:|    :...|.|   :|:.|..:..||..::..||
plant   663 AKETSYDALNNTPCLLP---SWISKAAARQR----RGRAGRVMPGECYHLYPRCVYEAFADYQQP 720

  Fly   646 SLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRL 710
            .|....|..:||.:|.|...: |||:|...:.||..::|.:||::||.|..|||.|::|.||..|
plant   721 ELLRTPLQSLCLQIKSLGLGS-ISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNL 784

  Fly   711 MDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYIQNSIKKER 775
            ..:||..:||:|||.|.:..||||::|:|:.||..||..:||.:             ::..:..|
plant   785 SMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDK-------------KDLAETAR 836

  Fly   776 TYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEY---EFMLNGLMEQLTSIRSEIVSSLRA 837
            :..|...:|||...||.|..|::.  .||...|   :|   .|:.:..::.:.|:|.:..:.|:.
plant   837 SKFSGRDYSDHLTLVRAYNGWKDA--ERTHSGY---DYCWKNFLSSQTLKAMDSMRKQFFNLLKE 896

  Fly   838 ANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPNIYAVDTRKSS--LKSAFSGNVSMHPNTVL 900
            |:||.     ::...:::|.:.|:|:|.:..||:|.:.:|..::.|  ||:...|.|.::.::| 
plant   897 ASLID-----NIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSV- 955

  Fly   901 RDFLEPLNISAQSFRTPWIVCN----------RQKSHIVYATLVV---PLAVAMFSGH 945
                   |.:......||:|.|          |..:.:..:.|::   .::...|.||
plant   956 -------NGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGH 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 43/163 (26%)
ANKYR <398..>460 CDD:440430 11/81 (14%)
ANK repeat 406..438 CDD:293786 6/50 (12%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 27/133 (20%)
HA2 687..789 CDD:461295 38/101 (38%)
OB_NTP_bind 862..945 CDD:400182 20/97 (21%)
AT1G48650NP_001154411.1 HrpA 299..>822 CDD:441249 149/632 (24%)
OB_NTP_bind 916..998 CDD:400182 19/89 (21%)
DSRM_SF 1106..1160 CDD:380679
Blue background indicates that the domain is not in the aligned region.

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