DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and FAS4

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_174605.1 Gene:FAS4 / 840232 AraportID:AT1G33390 Length:1237 Species:Arabidopsis thaliana


Alignment Length:877 Identity:168/877 - (19%)
Similarity:318/877 - (36%) Gaps:235/877 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 DLELYADLVSMKANASDLPSLHLPLPAIRPPNLRFWTEAQLNFL-------------TAFLGH-- 151
            ||.:.|:..|.|....|...: :||...|..:     |..::.|             .||:.|  
plant   171 DLMISAEESSSKLEVDDTVDM-IPLTTCRDDD-----EDSMDGLIENEDVTVQGPRVPAFVVHVS 229

  Fly   152 ---------------SLSDEILQSLYASRVIVYNAALCWDKSVFLPLVILD------DCRNKKSN 195
                           .:..||::::.....::.:......|:..:|..:.:      ...::...
plant   230 RPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGI 294

  Fly   196 VKIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQ-Q 259
            :.|....|.|:|||  ::|.|...|.:||:.||.|:.|...:..::.|.:.|....||.:.:. .
plant   295 IGITQPRRVAVLAT--AKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFL 357

  Fly   260 FRNISHLVVNDVHLHDPYTDILLSEIRMALSSHQN-----------------------LRVVLLS 301
            .|..|.:::::.|.....||||:..:...:...|.                       |:::|:|
plant   358 LRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLILMS 422

  Fly   302 QMGNPKKFTDFFGEGLQLNMIKQPEVAPR--------------VSYLNELHSCIALAGIHKGPDI 352
            .....:.|..  |:.|..|:....||..|              |.|:.|.:.        |...|
plant   423 ATLRVEDFVS--GKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYK--------KVMSI 477

  Fly   353 YKEIPE----AFRANNPRNEQM-DKCLQAYGELGTDAALRPFLYAVNYD---LAPVNYRHSLTGK 409
            :|::|:    .|.......:.: :|..::..||...||.|........|   ...|:.:     :
plant   478 HKKLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRDAYVKKKCDDGSFGGVDMK-----E 537

  Fly   410 TAVHFASELNKAN-----HLRLLLFMGADPYIV------DLFQQNAISLAAMNGNHECIDVLNSY 463
            .|..|..:.|..|     |       |.||..:      |.|::..:..:..:.:.|.:|     
plant   538 IAEAFDDDSNNQNSRFSSH-------GEDPSDIGDGNYDDDFEEEDMYESDEDRDWETVD----- 590

  Fly   464 SLHGYV---VKSAKPDFV--DYDLIIDIMYLLRTKP-----------EYSPGEYSPGNILIILPT 512
              .|:.   |:..|.|.:  .::.:.|....:..:|           |....::|||. |.:||.
plant   591 --DGFASSFVEEGKLDALRAAFNALADKNGSVSAEPAKSIAAENQEAEQVKNKFSPGK-LRVLPL 652

  Fly   513 YYHIVKLNYMILSHCLTGSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKVP 577
            |            ..|:.:.|               |:.......|...||:||::.|: .|.:|
plant   653 Y------------AMLSPAAQ---------------LRVFEEVEKEERLVVVATNVAET-SLTIP 689

  Fly   578 -FKYQIDTA-CRLNNVYDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQCFRLISKEAYEEL- 639
             .||.:||. .::.| ||:.:.......:|:::.:..:| .......|...|:||.|...:..: 
plant   690 GIKYVVDTGRVKVKN-YDSKTGMESYEVDWISQASASQR-AGRAGRTGPGHCYRLYSSAVFSNIF 752

  Fly   640 SETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVT 704
            .|:|.|.:..:.:|.:.|.:|  |.|....|.......|.|.. :..|.:.||.::.||....:|
plant   753 EESSLPEIMKVPVDGVILLMK--SMNIPKVENFPFPTPPEPSA-IREAERCLKALEALDSNGGLT 814

  Fly   705 WLGCRLMDIPVSCQLGRMLIFGI-LLR----------CLDPILTIVSSLSTADPLGIPF------ 752
            .||..:...|:|.:..|||:..| :|:          .|...:..|::||..:||.:.|      
plant   815 PLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKN 879

  Fly   753 -TEDIDNLWDRFTIYIQN----SIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDE 812
             ::|.|.     |:..::    ..:||:...:.::||             |...:.....|....
plant   880 ESKDADK-----TVKQEDKQRKKDRKEKIKAARDRFS-------------NPSSDALTVAYALHS 926

  Fly   813 YEFMLNGL------------MEQLTSIRSEIV 832
            :|...||:            |::::.::.:::
plant   927 FEVSENGMGFCEANGLHLKTMDEMSKLKDQLL 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 35/188 (19%)
ANKYR <398..>460 CDD:440430 13/72 (18%)
ANK repeat 406..438 CDD:293786 8/42 (19%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 31/146 (21%)
HA2 687..789 CDD:461295 29/123 (24%)
OB_NTP_bind 862..945 CDD:400182
FAS4NP_174605.1 HrpA 240..>834 CDD:441249 131/658 (20%)
HA2 797..920 CDD:461295 30/140 (21%)
OB_NTP_bind 1011..1085 CDD:400182
Blue background indicates that the domain is not in the aligned region.

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